RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 LCN1P31025 176 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 MAP3K8P41279 467 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 CRATP43155 626 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 CPA2P48052 419 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 PSMD4P55036 377 aaKnown RBP11.52□□□□□ -0.57
SNX17-208ENST00000493711 PSME3P61289 254 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 MRPS22P82650 360 aaKnown RBP11.52□□□□□ -0.57
SNX17-208ENST00000493711 RBBP4Q09028 425 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 DUSP8Q13202 625 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 LASP1Q14847 261 aaKnown RBP11.52□□□□□ -0.57
SNX17-208ENST00000493711 GTDC1Q4AE62 458 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 EXOSC6Q5RKV6 272 aaKnown RBP11.52□□□□□ -0.57
SNX17-208ENST00000493711 H3F3CQ6NXT2 135 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 C8orf82Q6P1X6 216 aaPredicted RBP11.52□□□□□ -0.57
SNX17-208ENST00000493711 INO80CQ6PI98 192 aaPredicted RBP11.52□□□□□ -0.57
SNX17-208ENST00000493711 RNF130Q86XS8 419 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 SLC30A8Q8IWU4 369 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 C9orf40Q8IXQ3 194 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 DND1Q8IYX4 353 aaKnown RBP11.52□□□□□ -0.57
SNX17-208ENST00000493711 GALNT16Q8N428 558 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 TNIP2Q8NFZ5 429 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 SLC22A8Q8TCC7 542 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 SNRNP27Q8WVK2 155 aaKnown RBP11.52□□□□□ -0.57
SNX17-208ENST00000493711 SLC9A6Q92581 669 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 JADE3Q92613 823 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 THOC3Q96J01 351 aaKnown RBP11.52□□□□□ -0.57
SNX17-208ENST00000493711 ZNF354BQ96LW1 612 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 GAL3ST4Q96RP7 486 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 MESP1Q9BRJ9 268 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 ING2Q9H160 280 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 EQTNQ9NQ60 294 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 CALML5Q9NZT1 146 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 OR10H1Q9Y4A9 318 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 ASH1LQ9NR48 2969 aaKnown RBP11.52□□□□□ -0.57
SNX17-208ENST00000493711 SEC16AO15027 2179 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 ARGFXA6NJG6 315 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 GYG2O15488 501 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 ALPPP05187 535 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 GUSBP08236 651 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 BMP2P12643 396 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 TRHRP34981 398 aaPredicted RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 KRT20P35900 424 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 MAN2A2P49641 1150 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 TMED10P49755 219 aaKnown RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 EEFSECP57772 596 aaKnown RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 DSTNP60981 165 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 POU6F2P78424 691 aaPredicted RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 SRSF6Q13247 344 aaKnown RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 CAPRIN1Q14444 709 aaKnown RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 DECR1Q16698 335 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 DEFB109BQ30KR1 87 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 PIGGQ5H8A4 983 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 CRB2Q5IJ48 1285 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 SAMD4BQ5PRF9 694 aaKnown RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.51□□□□□ -0.57
SNX17-208ENST00000493711 ERICH5Q6P6B1 374 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 BRICD5Q6PL45 260 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 OPN5Q6U736 354 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 SERPINA11Q86U17 422 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 RPS19BP1Q86WX3 136 aaKnown RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 SLC44A2Q8IWA5 706 aaPredicted RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 GPALPP1Q8IXQ4 340 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 ZNF321PQ8N8H1 164 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 COX18Q8N8Q8 333 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 ZNF441Q8N8Z8 693 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 RBM15BQ8NDT2 890 aaKnown RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 GPR151Q8TDV0 419 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 DOK4Q8TEW6 326 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 APOBEC4Q8WW27 367 aaKnown RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 ADIPOR1Q96A54 375 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 AURKBQ96GD4 344 aaPredicted RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 BTBD10Q9BSF8 475 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 G6PC3Q9BUM1 346 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 BTBD2Q9BX70 525 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 ITPAQ9BY32 194 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 OR51I1Q9H343 314 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 KAT8Q9H7Z6 458 aaKnown RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 ANKRA2Q9H9E1 313 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 POLE3Q9NRF9 147 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 MYOTQ9UBF9 498 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 ZNF223Q9UK11 482 aaPredicted RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 PRPF19Q9UMS4 504 aaKnown RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 YARS2Q9Y2Z4 477 aaKnown RBP11.51□□□□□ -0.57
SNX17-208ENST00000493711 SCN3AQ9NY46 2000 aa11.51□□□□□ -0.57
SNX17-208ENST00000493711 ITGB2P05107 769 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 ACP2P11117 423 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 ITGAMP11215 1152 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 GABRA3P34903 492 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 CPOXP36551 454 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 SLC7A2P52569 658 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 MVDP53602 400 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 MLF1P58340 268 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 MTPNP58546 118 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 SLC25A3Q00325 362 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 PSG6Q00889 435 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 Q0VFX4 171 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 MEP1AQ16819 746 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 CYP51A1Q16850 503 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 ZNF630Q2M218 657 aaPredicted RBP11.5□□□□□ -0.57
SNX17-208ENST00000493711 LACTB2Q53H82 288 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms