RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 RIBC2Q9H4K1 309 aa9.4□□□□□ -0.9
PRPF3-206ENST00000493553 MTHFD2LQ9H903 347 aaPredicted RBP9.4□□□□□ -0.9
PRPF3-206ENST00000493553 KCMF1Q9P0J7 381 aa9.4□□□□□ -0.9
PRPF3-206ENST00000493553 CA14Q9ULX7 337 aa9.4□□□□□ -0.9
PRPF3-206ENST00000493553 SH3GLB1Q9Y371 365 aa9.4□□□□□ -0.9
PRPF3-206ENST00000493553 CSNK1G3Q9Y6M4 447 aa9.4□□□□□ -0.9
PRPF3-206ENST00000493553 MKI67P46013 3256 aaKnown RBP9.4□□□□□ -0.9
PRPF3-206ENST00000493553 GOLGA4Q13439 2230 aaKnown RBP9.4□□□□□ -0.91
PRPF3-206ENST00000493553 TRBV23OR9-2A0A075B6M9 112 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 A0A0G2JN53 185 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 A0A1W2PRQ8 180 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 ENO4A6NNW6 628 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 H0YGG7 62 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 PGRMC2O15173 223 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 PLOD3O60568 738 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 GALR3O60755 368 aaPredicted RBP9.39□□□□□ -0.91
PRPF3-206ENST00000493553 CTSVO60911 334 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 COQ9O75208 318 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 UBXN7O94888 489 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 CPNE6O95741 557 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 GPR75O95800 540 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 ANGPTL1O95841 491 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 ATP1B1P05026 303 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 ALPPP05187 535 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 HMGN2P05204 90 aaKnown RBP9.39□□□□□ -0.91
PRPF3-206ENST00000493553 PROS1P07225 676 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 H1F0P07305 194 aaKnown RBP9.39□□□□□ -0.91
PRPF3-206ENST00000493553 OR12D1P0DN82 309 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 CD247P20963 164 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 CDH3P22223 829 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 PRKACGP22612 351 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 PRKAR1BP31321 381 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 KRT20P35900 424 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 LIMS1P48059 325 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 CXCL12P48061 93 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 DAPP51397 102 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 CRYBA2P53672 197 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 CDH12P55289 794 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 LIM2P55344 173 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 C21orf59P57076 290 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 RAB38P57729 211 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 CDC42P60953 191 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 ARF3P61204 181 aaPredicted RBP9.39□□□□□ -0.91
PRPF3-206ENST00000493553 ISL1P61371 349 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 ZP2Q05996 745 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 CD47Q08722 323 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 DGCR6Q14129 220 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 FAM53BQ14153 422 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 LARS2Q15031 903 aaKnown RBP9.39□□□□□ -0.91
PRPF3-206ENST00000493553 PRSS53Q2L4Q9 553 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 DEFB134Q4QY38 66 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 CDC73Q6P1J9 531 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 DHRS4L2Q6PKH6 230 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 CEP68Q76N32 757 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 TMEM179BQ7Z7N9 219 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 TRIM73Q86UV7 250 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 ERI1Q8IV48 349 aaKnown RBP9.39□□□□□ -0.91
PRPF3-206ENST00000493553 P3H2Q8IVL5 708 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 MMP21Q8N119 569 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 OR2L13Q8N349 312 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 GALNT15Q8N3T1 639 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 C19orf47Q8N9M1 422 aaKnown RBP9.39□□□□□ -0.91
PRPF3-206ENST00000493553 TRUB1Q8WWH5 349 aaKnown RBP9.39□□□□□ -0.91
PRPF3-206ENST00000493553 OIT3Q8WWZ8 545 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 FCGR1BQ92637 280 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 DHRS1Q96LJ7 313 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 HSPA12BQ96MM6 686 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 SLC6A18Q96N87 628 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 ALPK1Q96QP1 1244 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 NODALQ96S42 347 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 SLC38A3Q99624 504 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 LRRC61Q9BV99 259 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 TEX12Q9BXU0 123 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 ERVMER34-1Q9H9K5 563 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 KRCC1Q9NPI7 259 aaPredicted RBP9.39□□□□□ -0.91
PRPF3-206ENST00000493553 PLCXD1Q9NUJ7 323 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 C19orf53Q9UNZ5 99 aaPredicted RBP9.39□□□□□ -0.91
PRPF3-206ENST00000493553 SATB2Q9UPW6 733 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 TESMINQ9Y4I5 508 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 PCDHGB1Q9Y5G3 927 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 PCDHGA8Q9Y5G5 932 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 CORINQ9Y5Q5 1042 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 TRIOBPQ9H2D6 2365 aa9.39□□□□□ -0.91
PRPF3-206ENST00000493553 PRAMEF33A0A0G2JMD5 474 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 SH3D21A4FU49 640 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 TLCD2A6NGC4 264 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 VGLL3A8MV65 326 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 CLDN4O14493 209 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 SCAMP1O15126 338 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 AQP9O43315 295 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 UGT2B17O75795 530 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 OPN1SWP03999 348 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 RNH1P13489 461 aaKnown RBP9.38□□□□□ -0.91
PRPF3-206ENST00000493553 ITIH1P19827 911 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 GSTM3P21266 225 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 GGT2P36268 569 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 FEN1P39748 380 aaKnown RBP9.38□□□□□ -0.91
PRPF3-206ENST00000493553 CAPZBP47756 277 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 AFF3P51826 1226 aaKnown RBP9.38□□□□□ -0.91
PRPF3-206ENST00000493553 UGT2B15P54855 530 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms