RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SOX30O94993 753 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 CBX7O95931 251 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 CGAP01215 116 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 KLK1P06870 262 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 CSNK2A2P19784 350 aaPredicted RBP15.94■□□□□ 0.14
NUP50-218ENST00000493456 DPP4P27487 766 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 DEKP35659 375 aaKnown RBP15.94■□□□□ 0.14
NUP50-218ENST00000493456 ATP5J2P56134 94 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 GPX6P59796 221 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 SIRPAP78324 504 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 PSPHP78330 225 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 EFR3AQ14156 821 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 PFKFB4Q16877 469 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 CCNYL2Q5T2Q4 361 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 METTL2BQ6P1Q9 378 aaKnown RBP15.94■□□□□ 0.14
NUP50-218ENST00000493456 GOLGA7Q7Z5G4 137 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 TMBIM1Q969X1 311 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 IPPKQ9H8X2 491 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 CES1P1Q9UKY3 287 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 ACOT9Q9Y305 439 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 RNF11Q9Y3C5 154 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 ZNF175Q9Y473 711 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 PCDHA9Q9Y5H5 950 aa15.94■□□□□ 0.14
NUP50-218ENST00000493456 TNPO3Q9Y5L0 923 aaKnown RBP15.94■□□□□ 0.14
NUP50-218ENST00000493456 ZIC3O60481 467 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 TNFRSF21O75509 655 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 CLDN9O95484 217 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 IFNA2P01563 188 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 PPP3CBP16298 524 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 TBXA2RP21731 343 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 GRK2P25098 689 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 EMDP50402 254 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 MAPK12P53778 367 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 NR1H2P55055 460 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 DSCR4P56555 118 aaPredicted RBP15.93■□□□□ 0.14
NUP50-218ENST00000493456 TNK1Q13470 666 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 CAPRIN1Q14444 709 aaKnown RBP15.93■□□□□ 0.14
NUP50-218ENST00000493456 PODNL1Q6PEZ8 512 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 ZNF704Q6ZNC4 412 aaPredicted RBP15.93■□□□□ 0.14
NUP50-218ENST00000493456 CCDC91Q7Z6B0 441 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 MILR1Q7Z6M3 343 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 CTAGE3PQ8IX95 158 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 TRPC4APQ8TEL6 797 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 RNF138Q8WVD3 245 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 FIG4Q92562 907 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 NXNL1Q96CM4 212 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 BTBD9Q96Q07 612 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 RNF122Q9H9V4 155 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 PSME2Q9UL46 239 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 PROCRQ9UNN8 238 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 GPR55Q9Y2T6 319 aaPredicted RBP15.93■□□□□ 0.14
NUP50-218ENST00000493456 NBEAL1Q6ZS30 2694 aa15.93■□□□□ 0.14
NUP50-218ENST00000493456 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.92■□□□□ 0.14
NUP50-218ENST00000493456 EIF3HO15372 352 aaKnown RBP eCLIP15.92■□□□□ 0.14
NUP50-218ENST00000493456 ERAL1O75616 437 aaKnown RBP15.92■□□□□ 0.14
NUP50-218ENST00000493456 REM1O75628 298 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 GSTA2P09210 222 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 KRT20P35900 424 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 FEN1P39748 380 aaKnown RBP15.92■□□□□ 0.14
NUP50-218ENST00000493456 B3GALT5-AS1P59052 145 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 GUSBP1Q15486 140 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 ETFDHQ16134 617 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 FAM83EQ2M2I3 478 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 HMBOX1Q6NT76 420 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 SH2D5Q6ZV89 423 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 UBQLNLQ8IYU4 475 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 ZNF611Q8N823 705 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 OR4K17Q8NGC6 315 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 ADOQ96SZ5 270 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 MRPL1Q9BYD6 325 aaKnown RBP15.92■□□□□ 0.14
NUP50-218ENST00000493456 KLHL4Q9C0H6 718 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 SAYSD1Q9NPB0 183 aa15.92■□□□□ 0.14
NUP50-218ENST00000493456 A0A087X1B8 175 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 LINC01387J3KSC0 135 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 HS3ST1O14792 307 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 TSPAN2O60636 221 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 BCAS2O75934 225 aaPredicted RBP15.91■□□□□ 0.14
NUP50-218ENST00000493456 ALDOAP04075 364 aaKnown RBP15.91■□□□□ 0.14
NUP50-218ENST00000493456 FCGR2AP12318 317 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 NID1P14543 1247 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 TCEA1P23193 301 aaKnown RBP15.91■□□□□ 0.14
NUP50-218ENST00000493456 IL12BP29460 328 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 ARL1P40616 181 aaPredicted RBP15.91■□□□□ 0.14
NUP50-218ENST00000493456 GAS1P54826 345 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 OCRLQ01968 901 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 GANABQ14697 944 aaKnown RBP15.91■□□□□ 0.14
NUP50-218ENST00000493456 TRMT12Q53H54 448 aaKnown RBP15.91■□□□□ 0.14
NUP50-218ENST00000493456 RAET1LQ5VY80 246 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 FRG2Q64ET8 278 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 OR5M10Q6IEU7 315 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 C3orf62Q6ZUJ4 267 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 C22orf34Q6ZV56 151 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 PHC2Q8IXK0 858 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 CENPLQ8N0S6 344 aaPredicted RBP15.91■□□□□ 0.14
NUP50-218ENST00000493456 METTL4Q8N3J2 472 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 ZNF610Q8N9Z0 462 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 KLHL29Q96CT2 875 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 ERP27Q96DN0 273 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 FRG2BQ96QU4 278 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 PINK1Q9BXM7 581 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms