RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.44□□□□□ -0.42
MSH6-208ENST00000493177 NANOGP8Q6NSW7 305 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 IGFL3Q6UXB1 125 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 ARPINQ7Z6K5 226 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 RNF130Q86XS8 419 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 PGAM4Q8N0Y7 254 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 SIRT6Q8N6T7 355 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 NFAM1Q8NET5 270 aaPredicted RBP12.44□□□□□ -0.42
MSH6-208ENST00000493177 OR8J3Q8NGG0 315 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 BRIX1Q8TDN6 353 aaKnown RBP12.44□□□□□ -0.42
MSH6-208ENST00000493177 NEURL3Q96EH8 262 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 VMP1Q96GC9 406 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 C16orf58Q96GQ5 468 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 CPPED1Q9BRF8 314 aaPredicted RBP12.44□□□□□ -0.42
MSH6-208ENST00000493177 NANOGQ9H9S0 305 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 ZBTB20Q9HC78 741 aaPredicted RBP12.44□□□□□ -0.42
MSH6-208ENST00000493177 CORO2BQ9UQ03 480 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 CFL2Q9Y281 166 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 BSNQ9UPA5 3926 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 NUP214P35658 2090 aaPredicted RBP12.43□□□□□ -0.42
MSH6-208ENST00000493177 CPAMD8Q8IZJ3 1885 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 TRBV11-1A0A0K0K1C0 115 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 C1QCP02747 245 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 SERPINA7P05543 415 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 GNLYP22749 145 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 KHKP50053 298 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 ANXA11P50995 505 aaKnown RBP12.43□□□□□ -0.42
MSH6-208ENST00000493177 CLCN2P51788 898 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 SLC7A2P52569 658 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 Q0VFX4 171 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 DUSP8Q13202 625 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 MFAP5Q13361 173 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 ZNHIT3Q15649 155 aaPredicted RBP12.43□□□□□ -0.42
MSH6-208ENST00000493177 DNAL1Q4LDG9 190 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 RABL3Q5HYI8 236 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 HLA-DQA1Q5Y7H0 255 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 TNFAIP8L2Q6P589 184 aaPredicted RBP12.43□□□□□ -0.42
MSH6-208ENST00000493177 HSDL2Q6YN16 418 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 SLC29A4Q7RTT9 530 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 WDR53Q7Z5U6 358 aaPredicted RBP12.43□□□□□ -0.42
MSH6-208ENST00000493177 CISD2Q8N5K1 135 aaKnown RBP12.43□□□□□ -0.42
MSH6-208ENST00000493177 AMER2Q8N7J2 671 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 ZNF615Q8N8J6 731 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 Q8NA96 180 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 GALNT11Q8NCW6 608 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 OR52N2Q8NGI0 321 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 C16orf52Q8NHV5 167 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 SLC9A6Q92581 669 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 SLC7A6OSQ96CW6 309 aaPredicted RBP12.43□□□□□ -0.42
MSH6-208ENST00000493177 OTUB1Q96FW1 271 aaPredicted RBP12.43□□□□□ -0.42
MSH6-208ENST00000493177 GAL3ST4Q96RP7 486 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 ECSITQ9BQ95 431 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 GPATCH1Q9BRR8 931 aaKnown RBP12.43□□□□□ -0.42
MSH6-208ENST00000493177 BTBD10Q9BSF8 475 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 ACTRT3Q9BYD9 372 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.43□□□□□ -0.421e-8■■■■□ 21.4
MSH6-208ENST00000493177 C1orf21Q9H246 121 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 FOLH1BQ9HBA9 442 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 SPAG4Q9NPE6 437 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 AGPAT4Q9NRZ5 378 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 GPATCH2Q9NW75 528 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 TAS2R1Q9NYW7 299 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 NTMQ9P121 344 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 TEKT2Q9UIF3 430 aa12.43□□□□□ -0.42
MSH6-208ENST00000493177 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 C2orf92A0A1B0GVN3 265 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 A0A1W2PQ72 361 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 OR6C76A6NM76 312 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 ZFAND5O76080 213 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 CLPSP04118 112 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 IGKV3-11P04433 115 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 CELA2AP08217 269 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 ALOX5P09917 674 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 ETFAP13804 333 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 SLC6A2P23975 617 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 CPOXP36551 454 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 UQCRFS1P47985 274 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 EMDP50402 254 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 SLC37A1P57057 533 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 NCALDP61601 193 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 ZNF169Q14929 603 aaPredicted RBP12.42□□□□□ -0.42
MSH6-208ENST00000493177 CYP51A1Q16850 503 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 COX20Q5RI15 118 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 ABHD17BQ5VST6 288 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 PLAG1Q6DJT9 500 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 MFSD12Q6NUT3 480 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 CDC73Q6P1J9 531 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 BNC2Q6ZN30 1099 aaPredicted RBP12.42□□□□□ -0.42
MSH6-208ENST00000493177 Q6ZS92 163 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 ZNF771Q7L3S4 317 aaPredicted RBP12.42□□□□□ -0.42
MSH6-208ENST00000493177 KIF2BQ8N4N8 673 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 CDRT4Q8N9R6 151 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 OR10A6Q8NH74 314 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 M1APQ8TC57 530 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 ADAMTS15Q8TE58 950 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 TMEM125Q96AQ2 219 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 GIMAP5Q96F15 307 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 IMMP1LQ96LU5 166 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 OR7D2Q96RA2 312 aa12.42□□□□□ -0.42
MSH6-208ENST00000493177 LMF1Q96S06 567 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms