RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ZCCHC12Q6PEW1 402 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 BHLHB9Q6PI77 547 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 PAOXQ6QHF9 649 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 OR2M7Q8NG81 312 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 SPPL2AQ8TCT8 520 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 NR4A3Q92570 626 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 JADE3Q92613 823 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 MOAP1Q96BY2 351 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 TMCO6Q96DC7 493 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 C16orf58Q96GQ5 468 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 FRMD6Q96NE9 622 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 ADOQ96SZ5 270 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 SECISBP2Q96T21 854 aaKnown RBP12.85□□□□□ -0.35
CCM2-217ENST00000492883 BARD1Q99728 777 aaKnown RBP12.85□□□□□ -0.35
CCM2-217ENST00000492883 YIPF4Q9BSR8 244 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 CCDC134Q9H6E4 229 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 SH2D2AQ9NP31 389 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 DEPPQ9NTK1 212 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 FGFR1OP2Q9NVK5 253 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 FAM120CQ9NX05 1096 aaKnown RBP12.85□□□□□ -0.35
CCM2-217ENST00000492883 MRTO4Q9UKD2 239 aaKnown RBP12.85□□□□□ -0.35
CCM2-217ENST00000492883 CBLCQ9ULV8 474 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 FAF1Q9UNN5 650 aaPredicted RBP12.85□□□□□ -0.35
CCM2-217ENST00000492883 CHCHD2Q9Y6H1 151 aaPredicted RBP12.85□□□□□ -0.35
CCM2-217ENST00000492883 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 OR6C70A6NIJ9 312 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 NPIPA5E9PKD4 350 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 SCN2BO60939 215 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 ABCB7O75027 752 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 UGT2B11O75310 529 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 KCNH1O95259 989 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 HMGN2P05204 90 aaKnown RBP12.84□□□□□ -0.35
CCM2-217ENST00000492883 IL6P05231 212 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 ALOX5P09917 674 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 ZNF24P17028 368 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 NCF2P19878 526 aaPredicted RBP12.84□□□□□ -0.35
CCM2-217ENST00000492883 MST1P26927 711 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 RFC3P40938 356 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 RFX3P48380 749 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 MRPS22P82650 360 aaKnown RBP12.84□□□□□ -0.35
CCM2-217ENST00000492883 ELOAQ14241 798 aaKnown RBP12.84□□□□□ -0.35
CCM2-217ENST00000492883 LASP1Q14847 261 aaKnown RBP12.84□□□□□ -0.35
CCM2-217ENST00000492883 TBCELQ5QJ74 424 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 DESI1Q6ICB0 168 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 MFSD12Q6NUT3 480 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 GK5Q6ZS86 529 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 FBXW8Q8N3Y1 598 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 GALNT11Q8NCW6 608 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 OR5AK3PQ8NH89 298 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 FBXO30Q8TB52 745 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 SFXN5Q8TD22 340 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 PIK3R3Q92569 461 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 GIMAP5Q96F15 307 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 JSRP1Q96MG2 331 aaPredicted RBP12.84□□□□□ -0.35
CCM2-217ENST00000492883 COL21A1Q96P44 957 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 DOHHQ9BU89 302 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 METTL7AQ9H8H3 244 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 BTNL2Q9UIR0 455 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 CNOT11Q9UKZ1 510 aaKnown RBP12.84□□□□□ -0.35
CCM2-217ENST00000492883 NPIPA1Q9UND3 350 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 TRIM33Q9UPN9 1127 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.84□□□□□ -0.35
CCM2-217ENST00000492883 FAM208BQ5VWN6 2430 aa12.84□□□□□ -0.35
CCM2-217ENST00000492883 ATMQ13315 3056 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 ZFYVE26Q68DK2 2539 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 A0A0G2JMM0 328 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 A0A1W2PPB8 328 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 A0A1W2PRS3 328 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 PINLYPA6NC86 204 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 ANKRD33BA6NCL7 494 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 KIR3DP1A8MWS1 328 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 ACOT7O00154 380 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 TFECO14948 347 aaPredicted RBP12.83□□□□□ -0.36
CCM2-217ENST00000492883 HS6ST1O60243 411 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 TSPAN2O60636 221 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 NKX2-2O95096 273 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 KRT16P08779 473 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 EDN3P14138 238 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 UQCRC2P22695 453 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 CASP3P42574 277 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 POLR2JP52435 117 aaKnown RBP12.83□□□□□ -0.36
CCM2-217ENST00000492883 PNLIPRP2P54317 469 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 PSMD4P55036 377 aaKnown RBP12.83□□□□□ -0.36
CCM2-217ENST00000492883 PPIAP62937 165 aaKnown RBP12.83□□□□□ -0.36
CCM2-217ENST00000492883 LRRC74AQ0VAA2 488 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 SF3A3Q12874 501 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCM2-217ENST00000492883 EFR3AQ14156 821 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 ZNF324BQ6AW86 544 aaPredicted RBP12.83□□□□□ -0.36
CCM2-217ENST00000492883 ZNF621Q6ZSS3 439 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 C6orf120Q7Z4R8 191 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 CLEC4FQ8N1N0 589 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 ZFP62Q8NB50 900 aaPredicted RBP12.83□□□□□ -0.36
CCM2-217ENST00000492883 SLC16A11Q8NCK7 471 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 OR9I1Q8NGQ6 314 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 ADAMTS15Q8TE58 950 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 STON2Q8WXE9 905 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 HGDQ93099 445 aa12.83□□□□□ -0.36
CCM2-217ENST00000492883 EFHD2Q96C19 240 aaPredicted RBP12.83□□□□□ -0.36
CCM2-217ENST00000492883 OTUB1Q96FW1 271 aaPredicted RBP12.83□□□□□ -0.36
CCM2-217ENST00000492883 RMND5BQ96G75 393 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms