RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234		Q9N2J8	555 aa		12.12	□□□□□ -0.47
AGAP3-223	ENST00000492234	SACM1L	Q9NTJ5	587 aa		12.12	□□□□□ -0.47
AGAP3-223	ENST00000492234	RYDEN	Q9NUL5	291 aa	Known RBP	12.12	□□□□□ -0.47
AGAP3-223	ENST00000492234	NTM	Q9P121	344 aa		12.12	□□□□□ -0.47
AGAP3-223	ENST00000492234	KLF13	Q9Y2Y9	288 aa	Predicted RBP	12.12	□□□□□ -0.47
AGAP3-223	ENST00000492234	SVIL	O95425	2214 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	RNF103-CHMP3	A0A140T963	221 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	CCDC154	A6NI56	674 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	TTC36	A6NLP5	189 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	RFXANK	O14593	260 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	T	O15178	435 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	PEX1	O43933	1283 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	NME2P1	O60361	137 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	PPM1B	O75688	479 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	SORBS2	O94875	1100 aa	Known RBP	12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	PSMG1	O95456	288 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	HMGN2	P05204	90 aa	Known RBP	12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	GSN	P06396	782 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	CNR1	P21554	472 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	NME2	P22392	152 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	IL12B	P29460	328 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	CHI3L1	P36222	383 aa	Predicted RBP	12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	MRPL19	P49406	292 aa	Known RBP	12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	CASP9	P55211	416 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	GPR85	P60893	370 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	RPP38	P78345	283 aa	Known RBP	12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	IRX1	P78414	480 aa	Predicted RBP	12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	PSG6	Q00889	435 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	LRRC74A	Q0VAA2	488 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	LASP1	Q14847	261 aa	Known RBP	12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	NTRK2	Q16620	822 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	TIGD2	Q4W5G0	525 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	MFSD12	Q6NUT3	480 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	RPUSD3	Q6P087	351 aa	Known RBP	12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	ZCCHC12	Q6PEW1	402 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	FAM180A	Q6UWF9	173 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	ANGPTL8	Q6UXH0	198 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	C6orf120	Q7Z4R8	191 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	ZNF605	Q86T29	641 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	SULF2	Q8IWU5	870 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	TRIML2	Q8N7C3	387 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	GOLM1	Q8NBJ4	401 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	PSD4	Q8NDX1	1056 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	CPT1C	Q8TCG5	803 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	ADAMTS15	Q8TE58	950 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	PIK3R3	Q92569	461 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	DIO2	Q92813	273 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	SNRNP40	Q96DI7	357 aa	Known RBP	12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	OTUB1	Q96FW1	271 aa	Predicted RBP	12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	ITCH	Q96J02	903 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	CCDC115	Q96NT0	180 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	ADO	Q96SZ5	270 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	INPP5K	Q9BT40	448 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	LMF2	Q9BU23	707 aa	Known RBP	12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	EPN3	Q9H201	632 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	MRTO4	Q9UKD2	239 aa	Known RBP	12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	CBLC	Q9ULV8	474 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	VPS4A	Q9UN37	437 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	PCDHGB6	Q9Y5F9	930 aa		12.11	□□□□□ -0.47
AGAP3-223	ENST00000492234	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	GXYLT2	A0PJZ3	443 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	CCL3	P10147	92 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	ACP2	P11117	423 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	NAGA	P17050	411 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	MATN1	P21941	496 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	PIGA	P37287	484 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	CDKN2C	P42773	168 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	ZFP36L2	P47974	494 aa	Known RBP	12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	MEOX1	P50221	254 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	PMP22	Q01453	160 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	DECR1	Q16698	335 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	CYP27C1	Q4G0S4	372 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	PRR30	Q53SZ7	412 aa	Predicted RBP	12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	C6orf10	Q5SRN2	563 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	PRAMEF20	Q5VT98	475 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	BLOC1S3	Q6QNY0	202 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	NUP54	Q7Z3B4	507 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	SPATA21	Q7Z572	469 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	FUNDC1	Q8IVP5	155 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	SLC16A11	Q8NCK7	471 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	GRHL3	Q8TE85	626 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	EFHD2	Q96C19	240 aa	Predicted RBP	12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	SPDL1	Q96EA4	605 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	GIMAP5	Q96F15	307 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	RMND5B	Q96G75	393 aa	Predicted RBP	12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	SLC35G5	Q96KT7	338 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	JSRP1	Q96MG2	331 aa	Predicted RBP	12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	COL21A1	Q96P44	957 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	SLC35A5	Q9BS91	424 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	ACTRT3	Q9BYD9	372 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	CNIH4	Q9P003	139 aa		12.1	□□□□□ -0.47
AGAP3-223	ENST00000492234	PRRC2C	Q9Y520	2896 aa	Known RBP	12.09	□□□□□ -0.47
AGAP3-223	ENST00000492234	UGT2B11	O75310	529 aa		12.09	□□□□□ -0.47
AGAP3-223	ENST00000492234	KCNH1	O95259	989 aa		12.09	□□□□□ -0.47
AGAP3-223	ENST00000492234	CRYAB	P02511	175 aa	Known RBP	12.09	□□□□□ -0.47
AGAP3-223	ENST00000492234	KRT16	P08779	473 aa		12.09	□□□□□ -0.47
AGAP3-223	ENST00000492234	DRD4	P21917	467 aa		12.09	□□□□□ -0.47
AGAP3-223	ENST00000492234	RFC3	P40938	356 aa		12.09	□□□□□ -0.47
AGAP3-223	ENST00000492234	PSMD4	P55036	377 aa	Known RBP	12.09	□□□□□ -0.47
AGAP3-223	ENST00000492234	KCNJ2	P63252	427 aa		12.09	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms