RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 PARGQ86W56 976 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 LACC1Q8IV20 430 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 TRIM48Q8IWZ4 208 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 FAM26EQ8N5C1 309 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 SLC37A2Q8TED4 501 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 JPH3Q8WXH2 748 aaPredicted RBP10.06□□□□□ -0.8
USP4-214ENST00000491791 FGF11Q92914 225 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 UBE2FQ969M7 185 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 RERGQ96A58 199 aaPredicted RBP10.06□□□□□ -0.8
USP4-214ENST00000491791 SLC35A4Q96G79 324 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 C16orf58Q96GQ5 468 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 ZNF285Q96NJ3 590 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 STACQ99469 402 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 SEMA6CQ9H3T2 930 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 PIGUQ9H490 435 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 PRMT8Q9NR22 394 aaPredicted RBP10.06□□□□□ -0.8
USP4-214ENST00000491791 POLE3Q9NRF9 147 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 DUSP22Q9NRW4 184 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 HRASLS2Q9NWW9 162 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 TRPC4Q9UBN4 977 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 POMT2Q9UKY4 750 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 NDRG2Q9UN36 371 aaKnown RBP10.06□□□□□ -0.8
USP4-214ENST00000491791 SPACA6W5XKT8 324 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 CACNA1BQ00975 2339 aa10.06□□□□□ -0.8
USP4-214ENST00000491791 ATG2BQ96BY7 2078 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 EPG5Q9HCE0 2579 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 LOC105369274A0A096LPK9 316 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 LOC102723532A0A0G2JNH3 316 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 A0A0J9YVX5 310 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 SRPX2O60687 465 aaPredicted RBP10.05□□□□□ -0.8
USP4-214ENST00000491791 UGT2B17O75795 530 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 CLPXO76031 633 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 AK1P00568 194 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 ALPPP05187 535 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 RPS4Y1P22090 263 aaKnown RBP10.05□□□□□ -0.8
USP4-214ENST00000491791 UGT2B10P36537 528 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 TGFBR2P37173 567 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 IFNGR2P38484 337 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 UGT2B15P54855 530 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 OLR1P78380 273 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 MGAT2Q10469 447 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 FZD5Q13467 585 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 AQP6Q13520 282 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 GANABQ14697 944 aaKnown RBP10.05□□□□□ -0.8
USP4-214ENST00000491791 NCF4Q15080 339 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 ZNF750Q32MQ0 723 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 INAVAQ3KP66 663 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 PODNL1Q6PEZ8 512 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 MAMSTRQ6ZN01 415 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 Q6ZPB1 254 aaPredicted RBP10.05□□□□□ -0.8
USP4-214ENST00000491791 TRIM73Q86UV7 250 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 P2RY8Q86VZ1 359 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 OOSP2Q86WS3 158 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 RBM45Q8IUH3 476 aaKnown RBP10.05□□□□□ -0.8
USP4-214ENST00000491791 OR4N4Q8N0Y3 316 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 CADM4Q8NFZ8 388 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 OR7G2Q8NG99 324 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 OR6T1Q8NGN1 323 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 OR8J1Q8NGP2 316 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 ADAMTS15Q8TE58 950 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 DIO2Q92813 273 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 SLC38A4Q969I6 547 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 CTHRC1Q96CG8 243 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 KLHDC7BQ96G42 594 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 WFDC6Q9BQY6 131 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 FNDC11Q9BVV2 318 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 ITPAQ9BY32 194 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 POLDIP3Q9BY77 421 aaKnown RBP10.05□□□□□ -0.8
USP4-214ENST00000491791 CCDC90BQ9GZT6 254 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 RAB33BQ9H082 229 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 RASSF1Q9NS23 344 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 MRPS18AQ9NVS2 196 aaKnown RBP10.05□□□□□ -0.8
USP4-214ENST00000491791 IMPAD1Q9NX62 359 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 MKLN1Q9UL63 735 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 B3GNT3Q9Y2A9 372 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 CHST2Q9Y4C5 530 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 A3GALT2U3KPV4 340 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 SPTBN2O15020 2390 aa10.05□□□□□ -0.8
USP4-214ENST00000491791 IGHV1OR15-9A0A0B4J2B8 117 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 A0A1W2PR77 199 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 LILRA5A6NI73 299 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 METTL12A8MUP2 240 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 TLR4O00206 839 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 SCAMP1O15126 338 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 FMO6PO60774 539 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 OR5F1O95221 314 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 STATHP02808 62 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 ZNF182P17025 639 aaPredicted RBP10.04□□□□□ -0.8
USP4-214ENST00000491791 CD27P26842 260 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 CNR2P34972 360 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 CTSKP43235 329 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 MAP2K4P45985 399 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 GSSP48637 474 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 TUBA1BP68363 451 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 IGLV3-21P80748 117 aaPredicted RBP10.04□□□□□ -0.8
USP4-214ENST00000491791 CDK5Q00535 292 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 RHAGQ02094 409 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 CHRNEQ04844 493 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 TRAM2Q15035 370 aa10.04□□□□□ -0.8
USP4-214ENST00000491791 DECR1Q16698 335 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms