RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 WDR54Q9H977 334 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 DCAF13Q9NV06 445 aaKnown RBP8.81□□□□□ -1
BRCA1-219ENST00000491747 PAK1IP1Q9NWT1 392 aaPredicted RBP8.81□□□□□ -1
BRCA1-219ENST00000491747 SCN3BQ9NY72 215 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 MAN2B2Q9Y2E5 1009 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 PADI2Q9Y2J8 665 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 BOD1L1Q8NFC6 3051 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 PIEZO2Q9H5I5 2752 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 CACNA1GO43497 2377 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 ARGFXA6NJG6 315 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 K7EM74 188 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 NSA2O95478 260 aaKnown RBP8.8□□□□□ -1
BRCA1-219ENST00000491747 SLC35G6P0C7Q6 338 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 ZNF888P0CJ79 500 aaPredicted RBP8.8□□□□□ -1
BRCA1-219ENST00000491747 SMIM10L1P0DMW3 83 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 HNF4AP41235 474 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 ST13P50502 369 aaKnown RBP8.8□□□□□ -1
BRCA1-219ENST00000491747 ARHGDIAP52565 204 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 CXCR4P61073 352 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 RPL38P63173 70 aaKnown RBP8.8□□□□□ -1
BRCA1-219ENST00000491747 GTF2H2Q13888 395 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 NDUFA9Q16795 377 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 SMU1Q2TAY7 513 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 GTF2H2CQ6P1K8 395 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 TMIGD1Q6UXZ0 262 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 GOLGA7Q7Z5G4 137 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 MICU2Q8IYU8 434 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 AMER2Q8N7J2 671 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 OR5T3Q8NGG3 340 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 DNAJB8Q8NHS0 232 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 UTP15Q8TED0 518 aaKnown RBP8.8□□□□□ -1
BRCA1-219ENST00000491747 FBLIM1Q8WUP2 373 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 APOBEC4Q8WW27 367 aaKnown RBP8.8□□□□□ -1
BRCA1-219ENST00000491747 THAP4Q8WY91 577 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 SMIM10Q96HG1 83 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 REXO5Q96IC2 774 aaKnown RBP8.8□□□□□ -1
BRCA1-219ENST00000491747 TBCDQ9BTW9 1192 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 YIPF2Q9BWQ6 316 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 DPY30Q9C005 99 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 EPS8L2Q9H6S3 715 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 RMND5AQ9H871 391 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 OPTCQ9UBM4 332 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 TRPC4Q9UBN4 977 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 ZNF282Q9UDV7 671 aaPredicted RBP8.8□□□□□ -1
BRCA1-219ENST00000491747 HSPE1-MOB4S4R3N1 261 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 OR2W5A6NFC9 320 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 ZNF860A6NHJ4 632 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 SOCS6O14544 535 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 XPNPEP2O43895 674 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 PGRP06401 933 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 PRKACGP22612 351 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 IGFBP5P24593 272 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 MVKQ03426 396 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 RAPSNQ13702 412 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 PTGR1Q14914 329 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 ABRAXAS2Q15018 415 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 HIST2H2ACQ16777 129 aaPredicted RBP8.8□□□□□ -1
BRCA1-219ENST00000491747 ADPRMQ3LIE5 342 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 PAGE2BQ5JRK9 111 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 MILR1Q7Z6M3 343 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 MRGPREQ86SM8 312 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 HOMEZQ8IX15 550 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 SVOPQ8N4V2 548 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 LSM14AQ8ND56 463 aaKnown RBP8.8□□□□□ -1
BRCA1-219ENST00000491747 CNIH3Q8TBE1 160 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 PHF10Q8WUB8 498 aaKnown RBP8.8□□□□□ -1
BRCA1-219ENST00000491747 EFHD2Q96C19 240 aaPredicted RBP8.8□□□□□ -1
BRCA1-219ENST00000491747 EHD1Q9H4M9 534 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 NT5DC2Q9H857 520 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 IPPKQ9H8X2 491 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 CCNB1IP1Q9NPC3 277 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 HCN3Q9P1Z3 774 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 TSC22D4Q9Y3Q8 395 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 SLC22A7Q9Y694 548 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 U3KQV3 271 aa8.8□□□□□ -1
BRCA1-219ENST00000491747 ATRXP46100 2492 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 FAM220BPB1ANY3 271 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 H0YIG0 161 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 OR7A17O14581 309 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 GALR3O60755 368 aaPredicted RBP8.79□□□□□ -1
BRCA1-219ENST00000491747 MRPS14O60783 128 aaKnown RBP8.79□□□□□ -1
BRCA1-219ENST00000491747 ALOX12BO75342 701 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 RDH16O75452 317 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 KLHL18O94889 574 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 CD63P08962 238 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 ACVR2AP27037 513 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 AVPR1BP47901 424 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 RAB8AP61006 207 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 OLR1P78380 273 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 SLC35A2P78381 396 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 IRF8Q02556 426 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 PCDH1Q08174 1060 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 CD300CQ08708 224 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 KEAP1Q14145 624 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 BCL2A1Q16548 175 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 RUNDC3AQ59EK9 446 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 TOR1AIP1Q5JTV8 583 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 SYT6Q5T7P8 510 aaPredicted RBP8.79□□□□□ -1
BRCA1-219ENST00000491747 DNAJC14Q6Y2X3 702 aaPredicted RBP8.79□□□□□ -1
BRCA1-219ENST00000491747 MFSD4AQ8N468 514 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms