RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 GOLGA6L10A6NI86 522 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 CLCA1A8K7I4 914 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 ZIC3O60481 467 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 ULK1O75385 1050 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 ERN1O75460 977 aaKnown RBP8.08□□□□□ -1.12
HDAC3-211ENST00000491581 SNX4O95219 450 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 IGKV1D-16P01601 117 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 PROCP04070 461 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 ANXA4P09525 319 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-211ENST00000491581 GABRA1P14867 456 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 ATP5F1P24539 256 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-211ENST00000491581 PPICP45877 212 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 LHX2P50458 406 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 GFRA1P56159 465 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 NRG3P56975 720 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 B3GALT5-AS1P59052 145 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 PSG6Q00889 435 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 CSTF3Q12996 717 aaKnown RBP8.08□□□□□ -1.12
HDAC3-211ENST00000491581 BIKQ13323 160 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 RASA2Q15283 850 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 C6orf163Q5TEZ5 329 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 NSUN5P2Q63ZY6 315 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 METTL2BQ6P1Q9 378 aaKnown RBP8.08□□□□□ -1.12
HDAC3-211ENST00000491581 APOOLQ6UXV4 268 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 C22orf34Q6ZV56 151 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 Q71RC1 249 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-211ENST00000491581 TAOK1Q7L7X3 1001 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 ZNF551Q7Z340 670 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-211ENST00000491581 NUP54Q7Z3B4 507 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 ZAR1Q86SH2 424 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 CLYBLQ8N0X4 340 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 C4orf33Q8N1A6 199 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 PIK3R3Q92569 461 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 MTBPQ96DY7 904 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 ARSGQ96EG1 525 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 L3HYPDHQ96EM0 354 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 VSTM2LQ96N03 204 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 SMR3AQ99954 134 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 PIGQQ9BRB3 760 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 CLEC4MQ9H2X3 399 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-211ENST00000491581 DSN1Q9H410 356 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 GLIPR2Q9H4G4 154 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 SLC35C2Q9NQQ7 365 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 RASSF1Q9NS23 344 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 FBXO34Q9NWN3 711 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 QPCTLQ9NXS2 382 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 MED11Q9P086 117 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 KCNN3Q9UGI6 736 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 BAIAP2L1Q9UHR4 511 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 TMCO1Q9UM00 188 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 CCL27Q9Y4X3 112 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 F8P00451 2351 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 PRRC2AP48634 2157 aaKnown RBP8.08□□□□□ -1.12
HDAC3-211ENST00000491581 MBD3L4A6NDZ8 208 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-211ENST00000491581 MBD3L3A6NE82 208 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-211ENST00000491581 MBD3L5A6NJ08 208 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-211ENST00000491581 HSPB2A8KAH6 182 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 H0Y3Z8 333 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 SYT5O00445 386 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 SIAH2O43255 324 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 AKAP10O43572 662 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 KRT6AP02538 564 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 KRT6BP04259 564 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 CHRNGP07510 517 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 ABHD2P08910 425 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 TMIGD3P0DMS9 266 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-211ENST00000491581 CREB1P16220 341 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 TAC1P20366 129 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 DRD5P21918 477 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 GRK2P25098 689 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 ARRB2P32121 409 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 KRT6CP48668 564 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 ASCL1P50553 236 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 NCBP2P52298 156 aaKnown RBP eCLIP8.07□□□□□ -1.12
HDAC3-211ENST00000491581 DGKQP52824 942 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 SUCLG1P53597 346 aaKnown RBP8.07□□□□□ -1.12
HDAC3-211ENST00000491581 CLDN18P56856 261 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 ACSM2AQ08AH3 577 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 ZNF155Q12901 538 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-211ENST00000491581 LCP2Q13094 533 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 GAB1Q13480 694 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 HSPB2Q16082 182 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 SLC25A35Q3KQZ1 300 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 TBCELQ5QJ74 424 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 CES4AQ5XG92 561 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 ACSM2BQ68CK6 577 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 FAM71E1Q6IPT2 247 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 VWA1Q6PCB0 445 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 ZYG11AQ6WRX3 759 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 SPNS3Q6ZMD2 512 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 LARP4Q71RC2 724 aaKnown RBP eCLIP8.07□□□□□ -1.12
HDAC3-211ENST00000491581 MARCH3Q86UD3 253 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 LACC1Q8IV20 430 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 GATSQ8NAP1 163 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 MYRIPQ8NFW9 859 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 MBD3L2Q8NHZ7 208 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-211ENST00000491581 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.07□□□□□ -1.12
HDAC3-211ENST00000491581 AGR3Q8TD06 166 aa8.07□□□□□ -1.12
HDAC3-211ENST00000491581 UBLCP1Q8WVY7 318 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-211ENST00000491581 FIG4Q92562 907 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms