RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 UGT2B11O75310 529 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 REM1O75628 298 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 IDO1P14902 403 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 IL12BP29460 328 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 WNT3P56703 355 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 KCNK10P57789 538 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 UFM1P61960 85 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 KCNJ2P63252 427 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 GSTA3Q16772 222 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 PDCD4Q53EL6 469 aaKnown RBP14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 SPANXN4Q5MJ08 99 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 TMEM198Q66K66 360 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 WDR53Q7Z5U6 358 aaPredicted RBP14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 CDRT4Q8N9R6 151 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 OR4N2Q8NGD1 307 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 GIMAP5Q96F15 307 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 SLC35A4Q96G79 324 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 TEX37Q96LM6 180 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 COL21A1Q96P44 957 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 ZBTB18Q99592 522 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 DOHHQ9BU89 302 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 CXorf36Q9H7Y0 433 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 METTL7AQ9H8H3 244 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 IL1RL2Q9HB29 575 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 PROK2Q9HC23 129 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 Q9N2J8 555 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 TUBA8Q9NY65 449 aaPredicted RBP14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 BOKQ9UMX3 212 aaPredicted RBP14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 FAM166BA8MTA8 275 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 UBDO15205 165 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 POLR3GO15318 223 aaPredicted RBP14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 HS6ST1O60243 411 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 TSPAN2O60636 221 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 WISP2O76076 250 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 GLSO94925 669 aaPredicted RBP14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 UNC5CO95185 931 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 SOAT1P35610 550 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 CCT3P49368 545 aaKnown RBP14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 PRIM2P49643 509 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 IDH3AP50213 366 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 AQP5P55064 265 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 PPIAP62937 165 aaKnown RBP14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 HBA1P69905 142 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 FOXO1Q12778 655 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 EFR3AQ14156 821 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 EIF2S3LQ2VIR3 472 aaKnown RBP14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 FAM174BQ3ZCQ3 159 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 SPDYE7PQ495Y7 208 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 VPS26BQ4G0F5 336 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 CYP27C1Q4G0S4 372 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 KRTCAP3Q53RY4 240 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 ANXA8L1Q5VT79 327 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 BICRALQ6AI39 1079 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 DESI1Q6ICB0 168 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 MFSD12Q6NUT3 480 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 TMEM81Q6P7N7 255 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 BNC2Q6ZN30 1099 aaPredicted RBP14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 SLC22A16Q86VW1 577 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 CLECL1Q8IZS7 167 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 OR56A1Q8NGH5 318 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 PRR7Q8TB68 274 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 SFXN5Q8TD22 340 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 HOXB13Q92826 284 aaPredicted RBP14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 TMCO6Q96DC7 493 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 ZNF597Q96LX8 424 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 RILPQ96NA2 401 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 NODALQ96S42 347 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 ADOQ96SZ5 270 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 ANGPTL4Q9BY76 406 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 TCF7L2Q9NQB0 619 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 CBLCQ9ULV8 474 aa14.94□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 ASNA1O43681 348 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 EDF1O60869 148 aaKnown RBP14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 SNX4O95219 450 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 ACP2P11117 423 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 IL12AP29459 219 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 S100A3P33764 101 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 GABRA3P34903 492 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 MAP3K8P41279 467 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 CASP3P42574 277 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 PNLIPRP2P54317 469 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 PHC1P78364 1004 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 MRPS22P82650 360 aaKnown RBP14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 RBPJQ06330 500 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 GAB1Q13480 694 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 DECR1Q16698 335 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 ZCCHC12Q6PEW1 402 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 GHDCQ8N2G8 530 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 GLB1L3Q8NCI6 653 aaPredicted RBP14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 VPS37AQ8NEZ2 397 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 OR4A15Q8NGL6 344 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 FBXO30Q8TB52 745 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 SLC9A6Q92581 669 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 MOAP1Q96BY2 351 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 EFHD2Q96C19 240 aaPredicted RBP14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 JSRP1Q96MG2 331 aaPredicted RBP14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 EBF4Q9BQW3 602 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 CCDC28BQ9BUN5 200 aa14.93□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 OSBPL11Q9BXB4 747 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms