RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RAB17Q9H0T7 212 aa3□□□□□ -1.93
CD46-216ENST00000490278 FAM114A2Q9NRY5 505 aa3□□□□□ -1.93
CD46-216ENST00000490278 IMPAD1Q9NX62 359 aa3□□□□□ -1.93
CD46-216ENST00000490278 ZNF107Q9UII5 783 aaPredicted RBP3□□□□□ -1.93
CD46-216ENST00000490278 RNF115Q9Y4L5 304 aa3□□□□□ -1.93
CD46-216ENST00000490278 POGZQ7Z3K3 1410 aa3□□□□□ -1.93
CD46-216ENST00000490278 E9PMD0 336 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 SGK494L7N484 410 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 LGALS8O00214 317 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 NDUFA7O95182 113 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 THY1P04216 161 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 ARF4P18085 180 aaPredicted RBP2.99□□□□□ -1.93
CD46-216ENST00000490278 CCNA2P20248 432 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 CSRP3P50461 194 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 METAP1P53582 386 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 MRPS6P82932 125 aaKnown RBP2.99□□□□□ -1.93
CD46-216ENST00000490278 FUT7Q11130 342 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 PEX6Q13608 980 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 SLC10A1Q14973 349 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 ZIC1Q15915 447 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 TIMM50Q3ZCQ8 353 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 BEND6Q5SZJ8 279 aaPredicted RBP2.99□□□□□ -1.93
CD46-216ENST00000490278 RAET1GQ6H3X3 334 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 IRGCQ6NXR0 463 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 LEG1Q6P5S2 330 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 ERICH1Q86X53 443 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 NAXDQ8IW45 347 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 GPD1LQ8N335 351 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 LINC00612Q8N6U2 182 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 MINDY2Q8NBR6 621 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 CNNM3Q8NE01 707 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 RFESDQ8TAC1 157 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 FNDC8Q8TC99 324 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 VN1R17PQ8TDU5 208 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 FCGR1BQ92637 280 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 MRPL38Q96DV4 380 aaKnown RBP2.99□□□□□ -1.93
CD46-216ENST00000490278 KCNK16Q96T55 309 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 CARD6Q9BX69 1037 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 KRT23Q9C075 422 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 SLC7A10Q9NS82 523 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 DCAF13Q9NV06 445 aaKnown RBP2.99□□□□□ -1.93
CD46-216ENST00000490278 SOHLH2Q9NX45 425 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 GDAP2Q9NXN4 497 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 GHRLQ9UBU3 117 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 PRODH2Q9UF12 536 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 RSPH14Q9UHP6 348 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 NTNG1Q9Y2I2 539 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 NAALAD2Q9Y3Q0 740 aa2.99□□□□□ -1.93
CD46-216ENST00000490278 TRBV7-9A0A0J9YWB2 115 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 FBLL1A6NHQ2 334 aaKnown RBP2.98□□□□□ -1.93
CD46-216ENST00000490278 CCT8L1PA6NM43 557 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 EFCAB7A8K855 629 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 H3BTX0 84 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 IMPA2O14732 288 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 PHOX2AO14813 284 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 STAM2O75886 525 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 UMPSP11172 480 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 IGFBP5P24593 272 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 RPA1P27694 616 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 POU3F4P49335 361 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 FNTAP49354 379 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 STK19P49842 368 aaPredicted RBP2.98□□□□□ -1.93
CD46-216ENST00000490278 ARHGDIBP52566 201 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 PPIAP62937 165 aaKnown RBP2.98□□□□□ -1.93
CD46-216ENST00000490278 ZP4Q12836 540 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 SPP2Q13103 211 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 LDLRAP1Q5SW96 308 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 DMKNQ6E0U4 476 aaPredicted RBP2.98□□□□□ -1.93
CD46-216ENST00000490278 VITQ6UXI7 678 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 GCNT7Q6ZNI0 430 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 NET1Q7Z628 596 aaPredicted RBP2.98□□□□□ -1.93
CD46-216ENST00000490278 HSCBQ8IWL3 235 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 KLHL30-AS1Q8NEE0 82 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 SLC25A36Q96CQ1 311 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 DNAJA3Q96EY1 480 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 C11orf24Q96F05 449 aaPredicted RBP2.98□□□□□ -1.93
CD46-216ENST00000490278 ROPN1Q9HAT0 212 aaPredicted RBP2.98□□□□□ -1.93
CD46-216ENST00000490278 FAM120CQ9NX05 1096 aaKnown RBP2.98□□□□□ -1.93
CD46-216ENST00000490278 KLRF1Q9NZS2 232 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 P2RX2Q9UBL9 471 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 CLCA3PQ9Y6N3 262 aa2.98□□□□□ -1.93
CD46-216ENST00000490278 A0A1W2PQ72 361 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 TTC26A0AVF1 554 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 ALOX15BO15296 676 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 LCMT2O60294 686 aaKnown RBP2.97□□□□□ -1.93
CD46-216ENST00000490278 GJB5O95377 273 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 PTBP3O95758 552 aaKnown RBP2.97□□□□□ -1.93
CD46-216ENST00000490278 PGAM2P15259 253 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 DNAJB1P25685 340 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 MAGEA9P43362 315 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 CAMLGP49069 296 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 GMFBP60983 142 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 PAX2Q02962 417 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 RAB35Q15286 201 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 ZNF562Q6V9R5 426 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 CCDC36Q8IYA8 594 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 CERS5Q8N5B7 392 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 GPATCH11Q8N954 259 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 ZPLD1Q8TCW7 415 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 TFB1MQ8WVM0 346 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms