RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 FAM71E1Q6IPT2 247 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 MEX3BQ6ZN04 569 aaKnown RBP8.36□□□□□ -1.07
HDAC6-232ENST00000489053 ZCCHC23Q6ZST2 131 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 NCCRP1Q6ZVX7 275 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-232ENST00000489053 KIRREL3Q8IZU9 778 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 MREGQ8N565 214 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 OR7G2Q8NG99 324 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 CLHC1Q8NHS4 586 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 EFHD2Q96C19 240 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-232ENST00000489053 CTHRC1Q96CG8 243 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 TMEM41AQ96HV5 264 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 GNRHR2Q96P88 292 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 TSSK3Q96PN8 268 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 BTBD9Q96Q07 612 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 DMRTA2Q96SC8 542 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 PRPF18Q99633 342 aaKnown RBP8.36□□□□□ -1.07
HDAC6-232ENST00000489053 REEP4Q9H6H4 257 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 SH2D2AQ9NP31 389 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 ACKR4Q9NPB9 350 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 EQTNQ9NQ60 294 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 SDHAF3Q9NRP4 125 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 ATAD3AQ9NVI7 634 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 PPP4R1LQ9P1A2 415 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 MAPRE3Q9UPY8 281 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 EIF3LQ9Y262 564 aaKnown RBP8.36□□□□□ -1.07
HDAC6-232ENST00000489053 GPR55Q9Y2T6 319 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-232ENST00000489053 MYO7BQ6PIF6 2116 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 A0A087WV62 115 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 TTC36A6NLP5 189 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 CYSRT1A8MQ03 144 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 TMEM233B4DJY2 109 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 H0Y3Z8 333 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 PIP5K1BO14986 540 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 SNPHO15079 494 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 TO15178 435 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 SCO2O43819 266 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 ICOSLGO75144 302 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 PEX11AO75192 247 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 SKAP2O75563 359 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-232ENST00000489053 CBR3O75828 277 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 CHRNGP07510 517 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 BPGMP07738 259 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 HPGDP15428 266 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 PRPH2P23942 346 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 GRNP28799 593 aaKnown RBP8.35□□□□□ -1.07
HDAC6-232ENST00000489053 ZFP36L2P47974 494 aaKnown RBP8.35□□□□□ -1.07
HDAC6-232ENST00000489053 CDK9P50750 372 aaKnown RBP8.35□□□□□ -1.07
HDAC6-232ENST00000489053 PRKAG1P54619 331 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 NUP107P57740 925 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 PRR5P85299 388 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 MAD2L1Q13257 205 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-232ENST00000489053 CYP27C1Q4G0S4 372 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 HHATQ5VTY9 493 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 ANKRD26P1Q6NSI1 321 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 AAGABQ6PD74 315 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 ENPP6Q6UWR7 440 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 LRIG3Q6UXM1 1119 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 CHMP1BQ7LBR1 199 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 WDR53Q7Z5U6 358 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-232ENST00000489053 IFNEQ86WN2 208 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 CCDC71Q8IV32 467 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-232ENST00000489053 CHERPQ8IWX8 916 aaKnown RBP8.35□□□□□ -1.07
HDAC6-232ENST00000489053 ULK2Q8IYT8 1036 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 FNDC5Q8NAU1 212 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 CEP70Q8NHQ1 597 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 GPR151Q8TDV0 419 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 JADE3Q92613 823 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 ABTB1Q969K4 478 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-232ENST00000489053 TUBGCP3Q96CW5 907 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 VSTM2LQ96N03 204 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 AMDHD1Q96NU7 426 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 TMEM109Q9BVC6 243 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 TBL1XR1Q9BZK7 514 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 GLIPR2Q9H4G4 154 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 PTGES2Q9H7Z7 377 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 ANKRA2Q9H9E1 313 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 SLC24A3Q9HC58 644 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 HHATLQ9HCP6 504 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 GALNT9Q9HCQ5 603 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 SERHLQ9NQF3 203 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 TAS2R7Q9NYW3 318 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 SPRR3Q9UBC9 169 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 ZNF639Q9UID6 485 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 C19orf53Q9UNZ5 99 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-232ENST00000489053 RNF6Q9Y252 685 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 DNAJC15Q9Y5T4 150 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 SNX8Q9Y5X2 465 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 PTGDR2Q9Y5Y4 395 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 NBPF19A0A087WUL8 3843 aa8.35□□□□□ -1.07
HDAC6-232ENST00000489053 UQCRHLA0A096LP55 91 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 C2orf72A6NCS6 295 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 HSPB2A8KAH6 182 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 AHRRA9YTQ3 701 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 PLOD2O00469 737 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 DVL2O14641 736 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 ADAM10O14672 748 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 TM9SF1O15321 606 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 CFLARO15519 480 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 UGT2B11O75310 529 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 LYPLA1O75608 230 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms