RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 BMP7P18075 431 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 WNT3P56703 355 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 PCLAFQ15004 111 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 SLC25A35Q3KQZ1 300 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 NHSL2Q5HYW2 709 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 DCST1Q5T197 706 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 CLEC6AQ6EIG7 209 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 YRDCQ86U90 279 aaKnown RBP20.98■□□□□ 0.95
COL9A3-213ENST00000489045 C10orf107Q8IVU9 208 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 PM20D2Q8IYS1 436 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 CLYBLQ8N0X4 340 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 OR2W6PQ8NHA6 318 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 FAM76AQ8TAV0 307 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 TMCO6Q96DC7 493 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 SLC35A4Q96G79 324 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 SERHLQ9NQF3 203 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 HSPB2A8KAH6 182 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 ABCB7O75027 752 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 EPPINO95925 133 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 NCBP2P52298 156 aaKnown RBP eCLIP20.97■□□□□ 0.951e-8■■■□□ 16.6
COL9A3-213ENST00000489045 ZNF155Q12901 538 aaPredicted RBP20.97■□□□□ 0.95
COL9A3-213ENST00000489045 HSPB2Q16082 182 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 NOXRED1Q6NXP6 359 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 LACC1Q8IV20 430 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 WDSUB1Q8N9V3 476 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 TNIP2Q8NFZ5 429 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 ABTB1Q969K4 478 aaPredicted RBP20.97■□□□□ 0.95
COL9A3-213ENST00000489045 DOCK7Q96N67 2140 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 ADOQ96SZ5 270 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 STMN4Q9H169 189 aaPredicted RBP20.97■□□□□ 0.95
COL9A3-213ENST00000489045 TAS2R9Q9NYW1 312 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 MID2Q9UJV3 735 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 EXO1Q9UQ84 846 aaKnown RBP20.97■□□□□ 0.95
COL9A3-213ENST00000489045 CCL27Q9Y4X3 112 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 PTGDR2Q9Y5Y4 395 aa20.97■□□□□ 0.95
COL9A3-213ENST00000489045 TLDC2A0PJX2 215 aa20.96■□□□□ 0.95
COL9A3-213ENST00000489045 TSPAN2O60636 221 aa20.96■□□□□ 0.95
COL9A3-213ENST00000489045 COQ9O75208 318 aa20.96■□□□□ 0.95
COL9A3-213ENST00000489045 IL12BP29460 328 aa20.96■□□□□ 0.95
COL9A3-213ENST00000489045 NTSP30990 170 aa20.96■□□□□ 0.95
COL9A3-213ENST00000489045 KRT20P35900 424 aa20.96■□□□□ 0.95
COL9A3-213ENST00000489045 MC3RP41968 323 aa20.96■□□□□ 0.95
COL9A3-213ENST00000489045 TMEM107Q6UX40 140 aa20.96■□□□□ 0.95
COL9A3-213ENST00000489045 LARP4Q71RC2 724 aaKnown RBP eCLIP20.96■□□□□ 0.95
COL9A3-213ENST00000489045 SLC44A2Q8IWA5 706 aaPredicted RBP20.96■□□□□ 0.95
COL9A3-213ENST00000489045 NAXEQ8NCW5 288 aa20.96■□□□□ 0.95
COL9A3-213ENST00000489045 TAS2R7Q9NYW3 318 aa20.96■□□□□ 0.95
COL9A3-213ENST00000489045 FIS1Q9Y3D6 152 aa20.96■□□□□ 0.95
COL9A3-213ENST00000489045 WIF1Q9Y5W5 379 aa20.96■□□□□ 0.95
COL9A3-213ENST00000489045 TEP1Q99973 2627 aaKnown RBP20.95■□□□□ 0.94
COL9A3-213ENST00000489045 SEC22BO75396 215 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 CBR3O75828 277 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 CAPN3P20807 821 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 CEACAM8P31997 349 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-213ENST00000489045 DLX5P56178 289 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 PSPHP78330 225 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 EFR3AQ14156 821 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 IKBIPQ70UQ0 350 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 RELL2Q8NC24 303 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-213ENST00000489045 OR4N2Q8NGD1 307 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 EFHD2Q96C19 240 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-213ENST00000489045 WDYHV1Q96HA8 205 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 APOPT1Q96IL0 206 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 GATA5Q9BWX5 397 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-213ENST00000489045 OR2B2Q9GZK3 357 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 GLIPR2Q9H4G4 154 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 MKS1Q9NXB0 559 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 KCNN3Q9UGI6 736 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 WBP11Q9Y2W2 641 aaKnown RBP20.95■□□□□ 0.94
COL9A3-213ENST00000489045 OR10H1Q9Y4A9 318 aa20.95■□□□□ 0.94
COL9A3-213ENST00000489045 ANKHD1Q8IWZ3 2542 aaKnown RBP20.94■□□□□ 0.94
COL9A3-213ENST00000489045 A0A087WV62 115 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 AZIN1O14977 448 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 SLITRK5O94991 958 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 ACTL6AO96019 429 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 BMP5P22003 454 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 PRPH2P23942 346 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 PNLIPRP2P54317 469 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 MYBPHQ13203 477 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 KIAA0040Q15053 153 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 SF3B4Q15427 424 aaKnown RBP eCLIP20.94■□□□□ 0.945e-7■■■□□ 17.1
COL9A3-213ENST00000489045 NSUN5P2Q63ZY6 315 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 PLCZ1Q86YW0 608 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 OR14L1PQ8NHC6 308 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 METTL2AQ96IZ6 378 aaKnown RBP20.94■□□□□ 0.94
COL9A3-213ENST00000489045 EGLN2Q96KS0 407 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 TRIB1Q96RU8 372 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 ZNF559Q9BR84 538 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 IQCGQ9H095 443 aaKnown RBP20.94■□□□□ 0.94
COL9A3-213ENST00000489045 LRTM1Q9HBL6 345 aa20.94■□□□□ 0.94
COL9A3-213ENST00000489045 SLC28A1O00337 649 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 TACR1P25103 407 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 GCKP35557 465 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 TIMP3P35625 211 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 VSNL1P62760 191 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 PSG6Q00889 435 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 SH2D4BQ5SQS7 431 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 CDH24Q86UP0 819 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 TRABD2AQ86V40 505 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 RIBC1Q8N443 379 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms