RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 BUB1O43683 1085 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 RHBDL1O75783 438 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 PVRP15151 417 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 CHRNA3P32297 505 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 PTGER3P43115 390 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 BPIFB3P59826 476 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 SNX1Q13596 522 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 RUNX3Q13761 415 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 SLC10A1Q14973 349 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 PPP1R3AQ16821 1122 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 PARP6Q2NL67 630 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 ACSF3Q4G176 576 aaPredicted RBP2.48□□□□□ -2.01
CD46-215ENST00000488596 SLC25A30Q5SVS4 291 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 BEND6Q5SZJ8 279 aaPredicted RBP2.48□□□□□ -2.01
CD46-215ENST00000488596 IRGCQ6NXR0 463 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 OLFM4Q6UX06 510 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 RBM43Q6ZSC3 357 aaKnown RBP2.48□□□□□ -2.01
CD46-215ENST00000488596 Q7L0L9 218 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 P4HA3Q7Z4N8 544 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 TSEN54Q7Z6J9 526 aaKnown RBP2.48□□□□□ -2.01
CD46-215ENST00000488596 ERC1Q8IUD2 1116 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 SLC39A11Q8N1S5 342 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 MINDY2Q8NBR6 621 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 CNNM3Q8NE01 707 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 OR56B1Q8NGI3 324 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 RFESDQ8TAC1 157 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 U2AF1L4Q8WU68 220 aaKnown RBP2.48□□□□□ -2.01
CD46-215ENST00000488596 MCHR2Q969V1 340 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 NCLNQ969V3 563 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 ZBED6CLQ96FA7 236 aaPredicted RBP2.48□□□□□ -2.01
CD46-215ENST00000488596 CCT8L2Q96SF2 557 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 TSPAN18Q96SJ8 248 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 TRIM9Q9C026 710 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 ROPN1Q9HAT0 212 aaPredicted RBP2.48□□□□□ -2.01
CD46-215ENST00000488596 AMBNQ9NP70 447 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 RAI14Q9P0K7 980 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 P2RX2Q9UBL9 471 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 GHRLQ9UBU3 117 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 CIDEBQ9UHD4 219 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 RNF115Q9Y4L5 304 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 POGZQ7Z3K3 1410 aa2.48□□□□□ -2.01
CD46-215ENST00000488596 A0A1W2PQ72 361 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 TRIM49BA6NDI0 452 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 ZSCAN5CA6NGD5 496 aaPredicted RBP2.47□□□□□ -2.01
CD46-215ENST00000488596 EFCAB7A8K855 629 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 LGALS8O00214 317 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 PHOX2AO14813 284 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 TOXO94900 526 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 THY1P04216 161 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 ALPIP09923 528 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 GSTT2P0CG29 244 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 GSTT2BP0CG30 244 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 UMPSP11172 480 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 PTPN6P29350 595 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 HTR5AP47898 357 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 GMFBP60983 142 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 HERVK_113P63132 956 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 ERVK-8P63133 956 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 MRPS6P82932 125 aaKnown RBP2.47□□□□□ -2.01
CD46-215ENST00000488596 PAX2Q02962 417 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 EIF2B1Q14232 305 aaKnown RBP2.47□□□□□ -2.01
CD46-215ENST00000488596 SMC1AQ14683 1233 aaKnown RBP2.47□□□□□ -2.01
CD46-215ENST00000488596 ZIC1Q15915 447 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 TIMM50Q3ZCQ8 353 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 SLC39A4Q6P5W5 647 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 ZNF562Q6V9R5 426 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 ERASQ7Z444 233 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 ZSCAN30Q86W11 494 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 UNC5CLQ8IV45 518 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 FAM71CQ8NEG0 241 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 OR52B4Q8NGK2 314 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 DQX1Q8TE96 717 aaKnown RBP2.47□□□□□ -2.01
CD46-215ENST00000488596 ART4Q93070 314 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 ERVK-6Q9BXR3 956 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 NMNAT2Q9BZQ4 307 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 TIGARQ9NQ88 270 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.47□□□□□ -2.01
CD46-215ENST00000488596 DCAF13Q9NV06 445 aaKnown RBP2.47□□□□□ -2.01
CD46-215ENST00000488596 RSPH14Q9UHP6 348 aa2.47□□□□□ -2.01
CD46-215ENST00000488596 ZNF107Q9UII5 783 aaPredicted RBP2.47□□□□□ -2.01
CD46-215ENST00000488596 CUX2O14529 1486 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 TTC26A0AVF1 554 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 NPIPA2E9PIF3 369 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 PRAMEF12O95522 483 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 APBB3O95704 486 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 CA3P07451 260 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 SNRPCP09234 159 aaKnown RBP2.46□□□□□ -2.02
CD46-215ENST00000488596 SLC35G4P0C7Q5 338 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 SLC35E2P0CK97 266 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 LAMP1P11279 417 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 IL10P22301 178 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 DNAJB1P25685 340 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 ASMTP46597 345 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 RPL34P49207 117 aaKnown RBP2.46□□□□□ -2.02
CD46-215ENST00000488596 ARHGDIBP52566 201 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 RAB35Q15286 201 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 MICAQ29983 383 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 ADPRMQ3LIE5 342 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms