RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 OR10Q1Q8NGQ4 319 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 GOT1L1Q8NHS2 421 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 C1orf54Q8WWF1 131 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 SLC5A11Q8WWX8 675 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 ATL1Q8WXF7 558 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 ANKRD7Q92527 254 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 NEIL2Q969S2 332 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 NCLNQ969V3 563 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 FBXL8Q96CD0 374 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 NTNG2Q96CW9 530 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 LRRC46Q96FV0 321 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PDLIM5Q96HC4 596 aaKnown RBP4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 RASL10BQ96S79 203 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PIP5K1AQ99755 562 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 CCDC77Q9BR77 488 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 AIFM2Q9BRQ8 373 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 AICDAQ9GZX7 198 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 ATG10Q9H0Y0 220 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 CCDC68Q9H2F9 335 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PELI2Q9HAT8 420 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 BEX4Q9NWD9 120 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 HPF1Q9NWY4 346 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 FBXO5Q9UKT4 447 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PACSIN2Q9UNF0 486 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 ERVK-11Q9UQG0 969 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PLEKHA6Q9Y2H5 1048 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 LIPGQ9Y5X9 500 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 MPDZO75970 2070 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 ARHGAP21Q5T5U3 1957 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 TRGV11A0A075B6L2 103 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 TRGV5A0A0B4J1U4 118 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 A0A0G2JMM0 328 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 A0A1W2PPB8 328 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 A0A1W2PRS3 328 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 TCRBV7S3A2A0A539 114 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 CTAGE15A4D2H0 777 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 CTAGE9A4FU28 777 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 LRIT2A6NDA9 550 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SDR42E2A6NKP2 422 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 KIR3DP1A8MWS1 328 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 C4orf51C9J302 202 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 CTNSO60931 367 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 IL33O95760 270 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 TBX6O95947 436 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 FTCDO95954 541 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 HIST1H2AGP0C0S8 130 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 CD53P19397 219 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 HIST1H2ADP20671 130 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 PTMSP20962 102 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 CXCR5P32302 372 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 HPDP32754 393 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SOX3P41225 446 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SLC1A2P43004 574 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 NEK2P51955 445 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 STXBP1P61764 594 aaKnown RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 OLR1P78380 273 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 BASP1P80723 227 aaKnown RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 CDKL1Q00532 357 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 PLGLB1Q02325 96 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 ZNF844Q08AG5 666 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 THOC5Q13769 683 aaKnown RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 RCN2Q14257 317 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 CSHL1Q14406 222 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 EFTUD2Q15029 972 aaKnown RBP eCLIP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 ZNF791Q3KP31 576 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 CD300EQ496F6 205 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 NHSL2Q5HYW2 709 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SEL1L2Q5TEA6 688 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 OPN5Q6U736 354 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SBSNQ6UWP8 590 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 CLEC9AQ6UXN8 241 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 HSDL2Q6YN16 418 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 MBOAT1Q6ZNC8 495 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 MAATS1Q7Z4T9 603 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 CLNKQ7Z7G1 428 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 CTAGE6Q86UF2 777 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 LACC1Q8IV20 430 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 TMEM139Q8IV31 216 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 CNTN4Q8IWV2 1026 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 KLHDC8AQ8IYD2 350 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 DND1Q8IYX4 353 aaKnown RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SLC15A4Q8N697 577 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 NAXEQ8NCW5 288 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SIMC1Q8NDZ2 872 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 ACRBPQ8NEB7 543 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 TTLQ8NG68 377 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 OR5L2Q8NGL0 311 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 OR5M9Q8NGP3 310 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 OR14A16Q8NHC5 309 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 NEIL3Q8TAT5 605 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 NUBPLQ8TB37 319 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 PAQR8Q8TEZ7 354 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 PTPMT1Q8WUK0 201 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 EEF1AKMT1Q8WVE0 214 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SMPDL3BQ92485 455 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SLC9A6Q92581 669 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 DAZLQ92904 295 aaKnown RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 MS4A6EQ96DS6 147 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 HSPBAP1Q96EW2 488 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 PDLIM2Q96JY6 352 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms