RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ACVR2AP27037 513 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 KEAP1Q14145 624 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 GPR18Q14330 331 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 ADAMTS16Q8TE57 1224 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 C11orf24Q96F05 449 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-216ENST00000486741 ZNF354BQ96LW1 612 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 OR7D2Q96RA2 312 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 SGPP1Q9BX95 441 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 DPH1Q9BZG8 443 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 USP36Q9P275 1121 aaKnown RBP12.47□□□□□ -0.41
HMGN1-216ENST00000486741 YBX2Q9Y2T7 364 aaKnown RBP12.47□□□□□ -0.41
HMGN1-216ENST00000486741 MYO16Q9Y6X6 1858 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 DNAH12Q6ZR08 3092 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 CENPFP49454 3210 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 DICER1Q9UPY3 1922 aaKnown RBP12.47□□□□□ -0.41
HMGN1-216ENST00000486741 H0YGG7 62 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 ARF3P61204 181 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-216ENST00000486741 DPTQ07507 201 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 KLHL36Q8N4N3 616 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 OR2L8Q8NGY9 312 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 TBL1XR1Q9BZK7 514 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 CENPXA8MT69 81 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 IGFALSP35858 605 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 ISL1P61371 349 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 HNRNPA0Q13151 305 aaKnown RBP12.46□□□□□ -0.41
HMGN1-216ENST00000486741 ARHGAP40Q5TG30 622 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 AGBL4Q5VU57 503 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 SHISA6Q6ZSJ9 500 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 SPATC1Q76KD6 591 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 FBXL6Q8N531 539 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 GNPDA2Q8TDQ7 276 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 METTL21AQ8WXB1 218 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 MRPL38Q96DV4 380 aaKnown RBP12.46□□□□□ -0.41
HMGN1-216ENST00000486741 MBOAT4Q96T53 435 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 ACOT13Q9NPJ3 140 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 ZDBF2Q9HCK1 2354 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 C2orf92A0A1B0GVN3 265 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 CPNE3O75131 537 aaKnown RBP12.46□□□□□ -0.41
HMGN1-216ENST00000486741 CCNKO75909 580 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 CSTAP01040 98 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 ALDH3B2P48448 385 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 CRYZQ08257 329 aaKnown RBP12.46□□□□□ -0.41
HMGN1-216ENST00000486741 PLET1Q6UQ28 207 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 SLC36A4Q6YBV0 504 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 ZNF248Q8NDW4 579 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 OR13H1Q8NG92 308 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 GAB3Q8WWW8 586 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 GGHQ92820 318 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 DUS3LQ96G46 650 aaKnown RBP12.46□□□□□ -0.41
HMGN1-216ENST00000486741 SAMD8Q96LT4 415 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 AMDHD1Q96NU7 426 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 RACGAP1Q9H0H5 632 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 SLITRK2Q9H156 845 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 SLC7A7Q9UM01 511 aa12.46□□□□□ -0.41
HMGN1-216ENST00000486741 A0A0G2JPF8 293 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 LRIT2A6NDA9 550 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 HNRNPCL3B7ZW38 293 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 CSF2P04141 144 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 HNRNPCL4P0DMR1 293 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 NAA10P41227 235 aaPredicted RBP12.46□□□□□ -0.42
HMGN1-216ENST00000486741 MAZP56270 477 aaKnown RBP12.46□□□□□ -0.42
HMGN1-216ENST00000486741 QPRTQ15274 297 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 ELOCQ15369 112 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 PRSS36Q5K4E3 855 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 PLBD1Q6P4A8 553 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 GKN2Q86XP6 184 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 SYNPOQ8N3V7 929 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 ANKRD53Q8N9V6 530 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 DENND6BQ8NEG7 585 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 FANK1Q8TC84 345 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 OSTF1Q92882 214 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 RIT1Q92963 219 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 DMRTB1Q96MA1 342 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 NDC1Q9BTX1 674 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 CFHR5Q9BXR6 569 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 EGLN3Q9H6Z9 239 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 ERVK13-1Q9NX77 482 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 COPS7AQ9UBW8 275 aa12.46□□□□□ -0.42
HMGN1-216ENST00000486741 GFRA2O00451 464 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 XKRYO14609 159 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 NPC1O15118 1278 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 RCBTB2O95199 551 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 MAT1AQ00266 395 aaKnown RBP12.45□□□□□ -0.42
HMGN1-216ENST00000486741 REEP5Q00765 189 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 AMER3Q8N944 861 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 SLC16A11Q8NCK7 471 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 OR5T3Q8NGG3 340 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 OR6T1Q8NGN1 323 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 MOAP1Q96BY2 351 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 HSPE1-MOB4S4R3N1 261 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 FAM47E-STBD1D6RA91 191 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 IDH3BO43837 385 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 COQ9O75208 318 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 FCER2P06734 321 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 RNH1P13489 461 aaKnown RBP12.45□□□□□ -0.42
HMGN1-216ENST00000486741 CSRP3P50461 194 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 TPMTP51580 245 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 EPHA5P54756 1037 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 C11orf91Q3C1V1 193 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 ABHD17CQ6PCB6 329 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms