RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 EBPQ15125 230 aaKnown RBP11.83□□□□□ -0.52
HDAC6-229ENST00000486665 CDC73Q6P1J9 531 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 TNFAIP8L2Q6P589 184 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-229ENST00000486665 BHLHB9Q6PI77 547 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 ANGPTL8Q6UXH0 198 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 NPSR1Q6W5P4 371 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 CCDC121Q6ZUS5 278 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 SLC15A3Q8IY34 581 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 KBTBD2Q8IY47 623 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 HORMAD2Q8N7B1 307 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 ZNF441Q8N8Z8 693 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 SLC16A11Q8NCK7 471 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 OR52N2Q8NGI0 321 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 OR5D16Q8NGK9 328 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 THAP3Q8WTV1 239 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-229ENST00000486665 FER1L6-AS2Q96M78 137 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 LMF2Q9BU23 707 aaKnown RBP11.83□□□□□ -0.52
HDAC6-229ENST00000486665 THUMPD3Q9BV44 507 aaKnown RBP11.83□□□□□ -0.52
HDAC6-229ENST00000486665 ACTRT3Q9BYD9 372 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 DEFB126Q9BYW3 111 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 WWTR1Q9GZV5 400 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 OR51I1Q9H343 314 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 ATP13A2Q9NQ11 1180 aa11.83□□□□□ -0.52
HDAC6-229ENST00000486665 FAF1Q9UNN5 650 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-229ENST00000486665 GPR55Q9Y2T6 319 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-229ENST00000486665 USP9XQ93008 2570 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-229ENST00000486665 C2orf92A0A1B0GVN3 265 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 GXYLT2A0PJZ3 443 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 PRAMEF27A3QJZ7 478 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 A8MUI8 341 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 EVPLLA8MZ36 301 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 MAN1A2O60476 641 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 NUDT7P0C024 238 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 CT45A8P0DMV1 189 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 CT45A9P0DMV2 189 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 OR12D1P0DN82 309 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 GPX2P18283 190 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 GABRA3P34903 492 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 CRATP43155 626 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 PPICP45877 212 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 PRIM2P49643 509 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 GZMMP51124 257 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 SLC7A2P52569 658 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 POLE2P56282 527 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 PSG6Q00889 435 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 RGNQ15493 299 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 IGFBP7Q16270 282 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 DUSP5Q16690 384 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 CT45A2Q5DJT8 189 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 FCRLBQ6BAA4 426 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 ZCCHC12Q6PEW1 402 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 SLC29A4Q7RTT9 530 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 DEFB107AQ8IZN7 70 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 PGAM4Q8N0Y7 254 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 CDRT4Q8N9R6 151 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 OR4N2Q8NGD1 307 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 OR8J3Q8NGG0 315 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 OR8K3Q8NH51 312 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 MIPOL1Q8TD10 442 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 PSMF1Q92530 271 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 SLC9A6Q92581 669 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 RAB8BQ92930 207 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 THOC3Q96J01 351 aaKnown RBP11.82□□□□□ -0.52
HDAC6-229ENST00000486665 OR7D2Q96RA2 312 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 GAL3ST4Q96RP7 486 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 NXF5Q9H1B4 397 aaKnown RBP11.82□□□□□ -0.52
HDAC6-229ENST00000486665 PIF1Q9H611 641 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 KAT8Q9H7Z6 458 aaKnown RBP11.82□□□□□ -0.52
HDAC6-229ENST00000486665 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.82□□□□□ -0.52
HDAC6-229ENST00000486665 TMEM181Q9P2C4 612 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 PACSIN3Q9UKS6 424 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 USP22Q9UPT9 525 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 POLHQ9Y253 713 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 CFL2Q9Y281 166 aa11.82□□□□□ -0.52
HDAC6-229ENST00000486665 USP9YO00507 2555 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-229ENST00000486665 TEX15Q9BXT5 2789 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 A6NL46 340 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 WWP2O00308 870 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 HMGN4O00479 90 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 NME4O00746 187 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 ZNF354AO60765 605 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-229ENST00000486665 TNFRSF21O75509 655 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 ATP5HO75947 161 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 DNAJB5O75953 348 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 NKX2-2O95096 273 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 ALOX5P09917 674 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 DRD5P21918 477 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 PPIBP23284 216 aaKnown RBP11.81□□□□□ -0.52
HDAC6-229ENST00000486665 ST13P50502 369 aaKnown RBP11.81□□□□□ -0.52
HDAC6-229ENST00000486665 NR0B1P51843 470 aaKnown RBP11.81□□□□□ -0.52
HDAC6-229ENST00000486665 NCALDP61601 193 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 AIMP2Q13155 320 aaKnown RBP11.81□□□□□ -0.52
HDAC6-229ENST00000486665 KCNAB2Q13303 367 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 ADRM1Q16186 407 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 NNATQ16517 81 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 LACTB2Q53H82 288 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-229ENST00000486665 B3GNTL1Q67FW5 361 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-229ENST00000486665 TCTN3Q6NUS6 607 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 H3F3CQ6NXT2 135 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 BORAQ6PGQ7 559 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms