RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 PRG3Q9Y2Y8 225 aaPredicted RBP4.42□□□□□ -1.7
SMARCC1-206ENST00000485737 HSPB11Q9Y547 144 aa4.42□□□□□ -1.7
SMARCC1-206ENST00000485737 SPIN1Q9Y657 262 aaPredicted RBP4.42□□□□□ -1.7
SMARCC1-206ENST00000485737 POLR2AP24928 1970 aaKnown RBP4.42□□□□□ -1.7
SMARCC1-206ENST00000485737 VWA8A3KMH1 1905 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 A0A1B0GVI7 797 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 LINC00854A0A1B0GVQ3 168 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 GNG14A0A1W2PPG7 69 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ZNF503-AS2A6NEH8 195 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SLC22A31A6NKX4 558 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 TRIM77I1YAP6 450 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 TEX28O15482 410 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 CHST10O43529 356 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SGTAO43765 313 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 AKAP8O43823 692 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SH3BP5O60239 455 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 GREM1O60565 184 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 TBL1XO60907 577 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ZNF821O75541 412 aaPredicted RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 UBXN7O94888 489 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 KLHL18O94889 574 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 NFATC1O95644 943 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 CATP04040 527 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 RAF1P04049 648 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 HLA-DPB1P04440 258 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 FHP07954 510 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 LIMS3P0CW19 117 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 LIMS4P0CW20 117 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 PSKH1P11801 424 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ANXA3P12429 323 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ATP1B2P14415 290 aaPredicted RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 POU2F1P14859 743 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 HMGA1P17096 107 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 CTRB1P17538 263 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 POU1F1P28069 291 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 IMPA1P29218 277 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 RBMS1P29558 406 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 EVI2BP34910 448 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 BTCP35070 178 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 CHI3L1P36222 383 aaPredicted RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 BDKRB1P46663 353 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 OR1G1P47890 313 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 KCNJ5P48544 419 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 MTNR1BP49286 362 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 CLCNKAP51800 687 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 AGFG1P52594 562 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 RAG2P55895 527 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ERVFC1P60507 584 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 RPS13P62277 151 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 CDK5Q00535 292 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 FABP5Q01469 135 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 BDH1Q02338 343 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 TAP2Q03519 686 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 UBE3AQ05086 875 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 MXD1Q05195 221 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 C2orf80Q0P641 193 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ELAVL2Q12926 359 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 GANABQ14697 944 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 MFSD13AQ14CX5 517 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 CCL14Q16627 93 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 LEXMQ3ZCV2 418 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ARHGAP15Q53QZ3 475 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ENTPD8Q5MY95 495 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 CD276Q5ZPR3 534 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 GPR139Q6DWJ6 353 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 CTRB2Q6GPI1 263 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SDE2Q6IQ49 451 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SLC8B1Q6J4K2 584 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 TCTN3Q6NUS6 607 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ANKRD54Q6NXT1 300 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 MED27Q6P2C8 311 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 TEX261Q6UWH6 196 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ANGPTL8Q6UXH0 198 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 RSPO2Q6UXX9 243 aaPredicted RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SLC36A4Q6YBV0 504 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 USP45Q70EL2 814 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SLC24A5Q71RS6 500 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 UTS2BQ765I0 119 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 COMMD6Q7Z4G1 85 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 WDR53Q7Z5U6 358 aaPredicted RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 TSPAN33Q86UF1 283 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ADGRF3Q8IZF5 1079 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ESX1Q8N693 406 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 TCEANCQ8N8B7 351 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SYT14Q8NB59 555 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 POGLUT1Q8NBL1 392 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SLC37A3Q8NCC5 494 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ZNF680Q8NEM1 530 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 OR4K1Q8NGD4 311 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 OR52N1Q8NH53 320 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ABHD4Q8TB40 342 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 C16orf78Q8WTQ4 265 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ASZ1Q8WWH4 475 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 NR4A3Q92570 626 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SCRN2Q96FV2 425 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SCMH1Q96GD3 660 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 TRMT2BQ96GJ1 504 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ZNF354BQ96LW1 612 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 MTERF1Q99551 399 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 EFCAB11Q9BUY7 163 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms