RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 EIF3MQ7L2H7 374 aaKnown RBP6.48□□□□□ -1.37
BRCA1-216ENST00000484087 VASH1Q7L8A9 365 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-216ENST00000484087 UBE3DQ7Z6J8 389 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 HIPK1Q86Z02 1210 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 ZDHHC21Q8IVQ6 265 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 OR8K5Q8NH50 307 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 ZCCHC10Q8TBK6 192 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 ADAMTS17Q8TE56 1095 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 ABHD17AQ96GS6 310 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 CNBD2Q96M20 576 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 SERINC2Q96SA4 455 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 NDC1Q9BTX1 674 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 OSBPL10Q9BXB5 764 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 RBCK1Q9BYM8 510 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 TMEM38AQ9H6F2 299 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 SLC35C2Q9NQQ7 365 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 PRDM7Q9NQW5 492 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 CUTCQ9NTM9 273 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 TEX10Q9NXF1 929 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-216ENST00000484087 MS4A12Q9NXJ0 267 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 IFT80Q9P2H3 777 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-216ENST00000484087 FBXW2Q9UKT8 454 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 PTRH2Q9Y3E5 179 aaKnown RBP6.48□□□□□ -1.37
BRCA1-216ENST00000484087 MAP4K5Q9Y4K4 846 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 KLK4Q9Y5K2 254 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 DOCK10Q96BY6 2186 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 A0A0A6YYC8 382 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 OR2W5A6NFC9 320 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF860A6NHJ4 632 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 TMEM229AB2RXF0 380 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 C21orf140B9A014 251 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 I3L1I5 382 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PDLIM1O00151 329 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 SOCS2O14508 198 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 EI24O14681 340 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 JRKO75564 520 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ERAL1O75616 437 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 TNFAIP8O95379 198 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 RECKO95980 971 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 HPRP00739 348 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ALBP02768 609 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ITGB2P05107 769 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 MSL3P1P0C860 447 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF888P0CJ79 500 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 NR2F6P10588 404 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ETFAP13804 333 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ITGA2P17301 1181 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 CSNK2A2P19784 350 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 CPN2P22792 545 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 CERS1P27544 350 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PPP2R1BP30154 601 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 FRKP42685 505 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 CCT3P49368 545 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ALDH3A2P51648 485 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 CCL11P51671 97 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 NCBP2P52298 156 aaKnown RBP eCLIP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 TXNL4AP83876 142 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PRR5P85299 388 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 HYAL2Q12891 473 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 DAG1Q14118 895 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 GNA13Q14344 377 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ADRM1Q16186 407 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 MPEG1Q2M385 716 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 VWA2Q5GFL6 755 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZC3H12BQ5HYM0 836 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 OTUD3Q5T2D3 398 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 FAAH2Q6GMR7 532 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 MRM1Q6IN84 353 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 TMEM64Q6YI46 380 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF793Q6ZN11 406 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 SZRD1Q7Z422 152 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 C6orf120Q7Z4R8 191 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 VN1R4Q7Z5H5 301 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PATL1Q86TB9 770 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 STK32CQ86UX6 486 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 RNF130Q86XS8 419 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PTOV1Q86YD1 416 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZC3H7AQ8IWR0 971 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 C10orf111Q8N326 155 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 DHRSXQ8N5I4 330 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 METTL25Q8N6Q8 603 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 CSNK1A1LQ8N752 337 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 OR5AK3PQ8NH89 298 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 OR5K1Q8NHB7 308 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 MAGEE2Q8TD90 523 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 RASSF5Q8WWW0 418 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 TMBIM1Q969X1 311 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 C8orf44Q96CB5 159 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 NEURL3Q96EH8 262 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 TPD52L3Q96J77 140 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 SLC35G5Q96KT7 338 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 RDH12Q96NR8 316 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 OR2A5Q96R48 311 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 SLC29A1Q99808 456 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 RBM4BQ9BQ04 359 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 DPH2Q9BQC3 489 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 RBM4Q9BWF3 364 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 KLHL31Q9H511 634 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 RUBCNLQ9H714 662 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 CXorf36Q9H7Y0 433 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms