RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 COL8A1P27658 744 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 MAPK1P28482 360 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 GXYLT1Q4G148 440 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 ATP6AP1LQ52LC2 224 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 ANKRD26P1Q6NSI1 321 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 SLC30A6Q6NXT4 461 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 C3P1Q6ZMU1 363 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 PACS2Q86VP3 889 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 CLHC1Q8NHS4 586 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 RNF138Q8WVD3 245 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 ZBTB9Q96C00 473 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 PPCDCQ96CD2 204 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 JSRP1Q96MG2 331 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-205ENST00000482424 COL21A1Q96P44 957 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 TP63Q9H3D4 680 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-205ENST00000482424 ACSS1Q9NUB1 689 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-205ENST00000482424 B4GALT7Q9UBV7 327 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 ATP6V1HQ9UI12 483 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 RAP2CQ9Y3L5 183 aa18.35■□□□□ 0.53
CLIP2-205ENST00000482424 KLF2Q9Y5W3 355 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-205ENST00000482424 NPIPA2E9PIF3 369 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 NPIPA3F8WFD2 350 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 ICOSLGO75144 302 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 SKAP2O75563 359 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-205ENST00000482424 PRPS2P11908 318 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 ENDOUP21128 410 aaKnown RBP18.34■□□□□ 0.53
CLIP2-205ENST00000482424 MAN2A2P49641 1150 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 SMSP52788 366 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 SLC18A1P54219 525 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 PNLIPRP2P54317 469 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 TIGD3Q6B0B8 471 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 NCCRP1Q6ZVX7 275 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-205ENST00000482424 ZNF551Q7Z340 670 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-205ENST00000482424 R3HCC1LQ7Z5L2 792 aaKnown RBP18.34■□□□□ 0.53
CLIP2-205ENST00000482424 ZNF781Q8N8C0 355 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 CIDECQ96AQ7 238 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-205ENST00000482424 ZBED6CLQ96FA7 236 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-205ENST00000482424 SORT1Q99523 831 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 LDAHQ9H6V9 325 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 METTL7AQ9H8H3 244 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 DDX18Q9NVP1 670 aaKnown RBP18.34■□□□□ 0.53
CLIP2-205ENST00000482424 SH3BP4Q9P0V3 963 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 NTMQ9P121 344 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 FREM3P0C091 2139 aa18.34■□□□□ 0.53
CLIP2-205ENST00000482424 REM1O75628 298 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 ELAVL4P26378 380 aaKnown RBP18.33■□□□□ 0.52
CLIP2-205ENST00000482424 SLC1A6P48664 564 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 MLC1Q15049 377 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 SMU1Q2TAY7 513 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 SLC44A2Q8IWA5 706 aaPredicted RBP18.33■□□□□ 0.52
CLIP2-205ENST00000482424 LIX1Q8N485 282 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 OR4N2Q8NGD1 307 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 ZFP28Q8NHY6 868 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 NEIL3Q8TAT5 605 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 HOXB13Q92826 284 aaPredicted RBP18.33■□□□□ 0.52
CLIP2-205ENST00000482424 SARAFQ96BY9 339 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 TMCO6Q96DC7 493 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 GNRHR2Q96P88 292 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 OSBPL11Q9BXB4 747 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 TMBIM4Q9HC24 238 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 PNPLA3Q9NST1 481 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 SPRR3Q9UBC9 169 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 C15orf41Q9Y2V0 281 aa18.33■□□□□ 0.52
CLIP2-205ENST00000482424 PHF3Q92576 2039 aaKnown RBP18.32■□□□□ 0.52
CLIP2-205ENST00000482424 SNPHO15079 494 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 HPNP05981 417 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 DDX5P17844 614 aaKnown RBP18.32■□□□□ 0.52
CLIP2-205ENST00000482424 BGNP21810 368 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 GDF1P27539 372 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 PTPN6P29350 595 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 RPL3P39023 403 aaKnown RBP18.32■□□□□ 0.52
CLIP2-205ENST00000482424 MAP3K8P41279 467 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 MASP1P48740 699 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 CDK9P50750 372 aaKnown RBP18.32■□□□□ 0.52
CLIP2-205ENST00000482424 WDR4P57081 412 aaKnown RBP18.32■□□□□ 0.52
CLIP2-205ENST00000482424 ZNF155Q12901 538 aaPredicted RBP18.32■□□□□ 0.52
CLIP2-205ENST00000482424 HSPB3Q12988 150 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 STX3Q13277 289 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 EFR3AQ14156 821 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 CYP27C1Q4G0S4 372 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 IL23RQ5VWK5 629 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 TMEM211Q6ICI0 200 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 KIRREL3Q8IZU9 778 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 MARVELD2Q8N4S9 558 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 FNDC5Q8NAU1 212 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 OR1J4Q8NGS1 313 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 TLCD1Q96CP7 247 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 TUBGCP3Q96CW5 907 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 ADOQ96SZ5 270 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 LMF2Q9BU23 707 aaKnown RBP18.32■□□□□ 0.52
CLIP2-205ENST00000482424 ASIC5Q9NY37 505 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 PCDHGB3Q9Y5G1 929 aa18.32■□□□□ 0.52
CLIP2-205ENST00000482424 TMEM120BA0PK00 339 aa18.31■□□□□ 0.52
CLIP2-205ENST00000482424 PRAMEF25A6NGN4 478 aa18.31■□□□□ 0.52
CLIP2-205ENST00000482424 TTC36A6NLP5 189 aa18.31■□□□□ 0.52
CLIP2-205ENST00000482424 SCAMP2O15127 329 aaKnown RBP18.31■□□□□ 0.52
CLIP2-205ENST00000482424 KRT20P35900 424 aa18.31■□□□□ 0.52
CLIP2-205ENST00000482424 DCTP40126 519 aa18.31■□□□□ 0.52
CLIP2-205ENST00000482424 RPL14P50914 215 aaKnown RBP18.31■□□□□ 0.52
CLIP2-205ENST00000482424 MANFP55145 182 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms