RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ODF3L2Q3SX64 289 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 CARD17Q5XLA6 110 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 GGNBP1Q5YKI7 109 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 ADNP2Q6IQ32 1131 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 CEACAM20Q6UY09 585 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 NDUFAF7Q7L592 441 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 CHERPQ8IWX8 916 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 PRR26Q8N8Z3 221 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 NFAM1Q8NET5 270 aaPredicted RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 LHX4Q969G2 390 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 TMEM18Q96B42 140 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 ZG16BQ96DA0 208 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 DHTKD1Q96HY7 919 aaPredicted RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 ACBD6Q9BR61 282 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 ZNF160Q9HCG1 818 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 EURLQ9NYK6 297 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 LCMT1Q9UIC8 334 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 POFUT2Q9Y2G5 429 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 TCP10L2B9ZVM9 353 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 NDUFS7O75251 213 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 NIPSNAP2O75323 286 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 PRKRAO75569 313 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 ANXA13P27216 316 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 MMP12P39900 470 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 POU3F4P49335 361 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 NDST1P52848 882 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 RPL23AP62750 156 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 CSNK2BP67870 215 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 NCBP1Q09161 790 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 DMP1Q13316 513 aaPredicted RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 PCID2Q5JVF3 399 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 WLSQ5T9L3 541 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 NDUFAF5Q5TEU4 345 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 LYPLAL1Q5VWZ2 237 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 AP1ARQ63HQ0 302 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 FAM173BQ6P4H8 233 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 LCNL1Q6ZST4 164 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 GPR141Q7Z602 305 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 VRK2Q86Y07 508 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 SELENOHQ8IZQ5 122 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 TERB1Q8NA31 727 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 SCCPDHQ8NBX0 429 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 KCNG3Q8TAE7 436 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 SLC22A8Q8TCC7 542 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 Q8TCH9 128 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 TSEN15Q8WW01 171 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 ELMO1Q92556 727 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 ARL5BQ96KC2 179 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 MARK4Q96L34 752 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 TGS1Q96RS0 853 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 POLDIP3Q9BY77 421 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 ACKR4Q9NPB9 350 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 CTSFQ9UBX1 484 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 MIOXQ9UGB7 285 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 UTS2RQ9UKP6 389 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 ST3GAL5Q9UNP4 418 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 CHMP2BQ9UQN3 213 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 A0A087WUV0 522 aaPredicted RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 TRAV24A0A0B4J272 114 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 A0A1B0GVL5 298 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 MGST3O14880 152 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 SIVA1O15304 175 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 BUD23O43709 281 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 SAGP10523 405 aaPredicted RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 SLC2A3P11169 496 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 FGF5P12034 268 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 ZNF44P15621 663 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 LMO1P25800 156 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 SYKP43405 635 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 CASP4P49662 377 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 BCAP31P51572 246 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 CTSL3PQ5NE16 218 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 ARMC6Q6NXE6 501 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 METTL2BQ6P1Q9 378 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 BZW1Q7L1Q6 419 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 SFTPA2Q8IWL1 248 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 LINC01561Q8N1V8 128 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 EMC1Q8N766 993 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 ACER1Q8TDN7 264 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 SCFD1Q8WVM8 642 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 METTL2AQ96IZ6 378 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 PLIN2Q99541 437 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 CHP1Q99653 195 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 CMKLR1Q99788 373 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 RBM4BQ9BQ04 359 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 RBM4Q9BWF3 364 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 AAMDCQ9H7C9 122 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 SDHAF3Q9NRP4 125 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 TECRQ9NZ01 308 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 CHMP5Q9NZZ3 219 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 TXNDC16Q9P2K2 825 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 RAP2CQ9Y3L5 183 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 SRPRBQ9Y5M8 271 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 UBIAD1Q9Y5Z9 338 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 VCANP13611 3396 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 DNAH7Q8WXX0 4024 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 DYNC2H1Q8NCM8 4307 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 NPEPPSL1A6NEC2 478 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 I6L893 689 aaPredicted RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 ZNF197O14709 1029 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms