RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 CD46P15529 392 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 PRPS1L1P21108 318 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 GNLYP22749 145 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 ABCD3P28288 659 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 PIGAP37287 484 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 MEOX1P50221 254 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 TDGF1P3P51864 188 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 DGKQP52824 942 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 MANFP55145 182 aaKnown RBP9.73□□□□□ -0.85
SSBP1-210ENST00000481508 PSG6Q00889 435 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 GUCY1A3Q02108 690 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 ZNF155Q12901 538 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-210ENST00000481508 PGS1Q32NB8 556 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 CT45A2Q5DJT8 189 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 SPANXN4Q5MJ08 99 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 CPTPQ5TA50 214 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 PRAMEF20Q5VT98 475 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 HLA-DQA1Q5Y7H0 255 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 CGB2Q6NT52 195 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 OPN5Q6U736 354 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 RTL4Q6ZR62 310 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 R3HCC1LQ7Z5L2 792 aaKnown RBP9.73□□□□□ -0.85
SSBP1-210ENST00000481508 SPATA19Q7Z5L4 167 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 ANKRD46Q86W74 232 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 GPALPP1Q8IXQ4 340 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 LRRC34Q8IZ02 419 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 C17orf47Q8NEP4 570 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 OR9I1Q8NGQ6 314 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 FBXO30Q8TB52 745 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 ACTRT2Q8TDY3 377 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 HGDQ93099 445 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 ERP27Q96DN0 273 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 OMA1Q96E52 524 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 ZBED6CLQ96FA7 236 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-210ENST00000481508 LCORQ96JN0 433 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-210ENST00000481508 BTBD9Q96Q07 612 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 DUSP26Q9BV47 211 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 DPY30Q9C005 99 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 CXorf36Q9H7Y0 433 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 EQTNQ9NQ60 294 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 ACSS1Q9NUB1 689 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-210ENST00000481508 DDX18Q9NVP1 670 aaKnown RBP9.73□□□□□ -0.85
SSBP1-210ENST00000481508 PRODH2Q9UF12 536 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 PCDHGB6Q9Y5F9 930 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 NPFFR2Q9Y5X5 522 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 COPG1Q9Y678 874 aaKnown RBP9.73□□□□□ -0.85
SSBP1-210ENST00000481508 GTF3C1Q12789 2109 aa9.73□□□□□ -0.85
SSBP1-210ENST00000481508 GXYLT2A0PJZ3 443 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 FRG2CA6NGY1 282 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 C17orf51A8MQB3 221 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 E9PBE3 544 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 TO15178 435 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 ATP8B1O43520 1251 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 BCAS2O75934 225 aaPredicted RBP9.72□□□□□ -0.85
SSBP1-210ENST00000481508 ABCB1P08183 1280 aaPredicted RBP9.72□□□□□ -0.85
SSBP1-210ENST00000481508 ACP2P11117 423 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 DRD5P21918 477 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 GPC1P35052 558 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 RPL3P39023 403 aaKnown RBP9.72□□□□□ -0.85
SSBP1-210ENST00000481508 PPICP45877 212 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 DNASE1L1P49184 302 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 AQP5P55064 265 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 HBA1P69905 142 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 SF3A3Q12874 501 aaKnown RBP eCLIP9.72□□□□□ -0.85
SSBP1-210ENST00000481508 INAQ16352 499 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 NTRK2Q16620 822 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 EXOSC6Q5RKV6 272 aaKnown RBP9.72□□□□□ -0.85
SSBP1-210ENST00000481508 FAM180AQ6UWF9 173 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 LIAT1Q6ZQX7 453 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 SIAH3Q8IW03 269 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 SLC44A2Q8IWA5 706 aaPredicted RBP9.72□□□□□ -0.85
SSBP1-210ENST00000481508 SLC15A4Q8N697 577 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 TMEM178AQ8NBL3 297 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 FAM13CQ8NE31 585 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 NUP43Q8NFH3 380 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 OR2M7Q8NG81 312 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 OR5AK3PQ8NH89 298 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 ZFP28Q8NHY6 868 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 FAR1Q8WVX9 515 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 OR5P2Q8WZ92 322 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 HOXB13Q92826 284 aaPredicted RBP9.72□□□□□ -0.85
SSBP1-210ENST00000481508 TMBIM1Q969X1 311 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 TESCQ96BS2 214 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 FAM120BQ96EK7 910 aaKnown RBP9.72□□□□□ -0.85
SSBP1-210ENST00000481508 C16orf58Q96GQ5 468 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 NODALQ96S42 347 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 SLX1AQ9BQ83 275 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 YIPF4Q9BSR8 244 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 BHLHE41Q9C0J9 482 aaPredicted RBP9.72□□□□□ -0.85
SSBP1-210ENST00000481508 MED4Q9NPJ6 270 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 FLRT3Q9NZU0 649 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 NTMQ9P121 344 aa9.72□□□□□ -0.85
SSBP1-210ENST00000481508 DIDO1Q9BTC0 2240 aaKnown RBP9.72□□□□□ -0.85
SSBP1-210ENST00000481508 DNAJC13O75165 2243 aa9.71□□□□□ -0.85
SSBP1-210ENST00000481508 LRRC3CA6NJW4 275 aa9.71□□□□□ -0.86
SSBP1-210ENST00000481508 FAM166BA8MTA8 275 aa9.71□□□□□ -0.86
SSBP1-210ENST00000481508 B4DXG7 233 aa9.71□□□□□ -0.86
SSBP1-210ENST00000481508 CDK2AP1O14519 115 aa9.71□□□□□ -0.86
SSBP1-210ENST00000481508 ADAM10O14672 748 aa9.71□□□□□ -0.86
SSBP1-210ENST00000481508 TSPAN2O60636 221 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms