RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 ADNPQ9H2P0 1102 aa3.08□□□□□ -1.92
CBX3-207ENST00000481300 ELL3Q9HB65 397 aaPredicted RBP3.08□□□□□ -1.92
CBX3-207ENST00000481300 SLC25A19Q9HC21 320 aa3.08□□□□□ -1.92
CBX3-207ENST00000481300 IL19Q9UHD0 177 aa3.08□□□□□ -1.92
CBX3-207ENST00000481300 ZNF346Q9UL40 294 aaKnown RBP3.08□□□□□ -1.92
CBX3-207ENST00000481300 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.08□□□□□ -1.92
CBX3-207ENST00000481300 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.07□□□□□ -1.92
CBX3-207ENST00000481300 TOGARAM1Q9Y4F4 1720 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 KDM3BQ7LBC6 1761 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 A0A1B0GTH9 108 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 TEX48A0A1B0GUV7 120 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 SLC9B1P1A6NJY1 282 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 ERI2A8K979 691 aaKnown RBP3.07□□□□□ -1.92
CBX3-207ENST00000481300 RNF212BA8MTL3 300 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 SHISA9B4DS77 424 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 HIP1O00291 1037 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 RNF113AO15541 343 aaKnown RBP3.07□□□□□ -1.92
CBX3-207ENST00000481300 TXNL1O43396 289 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 TSPAN2O60636 221 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 FRAT2O75474 233 aaPredicted RBP3.07□□□□□ -1.92
CBX3-207ENST00000481300 BCAS2O75934 225 aaPredicted RBP3.07□□□□□ -1.92
CBX3-207ENST00000481300 UFL1O94874 794 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 REC8O95072 547 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 CXCL14O95715 111 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 FCER2P06734 321 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 APRTP07741 180 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 HSD17B1P14061 328 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 CAPN2P17655 700 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 SHC1P29353 583 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 PPP2R1BP30154 601 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 TNFRSF4P43489 277 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 GYG1P46976 350 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 CASP9P55211 416 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 SLC1A5Q15758 541 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 TMEM44Q2T9K0 475 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 CAVIN4Q5BKX8 364 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 CMPK2Q5EBM0 449 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 C9orf66Q5T8R8 295 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 STEAP1BQ6NZ63 245 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 DLEU7Q6UYE1 221 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 TIPARPQ7Z3E1 657 aaKnown RBP3.07□□□□□ -1.92
CBX3-207ENST00000481300 MIER3Q7Z3K6 550 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 RABEPKQ7Z6M1 372 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 ARL10Q8N8L6 244 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 CCNYQ8ND76 341 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 CHDHQ8NE62 594 aaPredicted RBP3.07□□□□□ -1.92
CBX3-207ENST00000481300 TMEM185AQ8NFB2 350 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 BEST4Q8NFU0 473 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 ZNF577Q9BSK1 485 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 CCDC28BQ9BUN5 200 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 CARD9Q9H257 536 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 HOMER3Q9NSC5 361 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 ANO10Q9NW15 660 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 TRIM10Q9UDY6 481 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 FETUBQ9UGM5 382 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 FAM153AQ9UHL3 310 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 ENTPD4Q9Y227 616 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 ATP6V0A2Q9Y487 856 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 SALL1Q9NSC2 1324 aa3.07□□□□□ -1.92
CBX3-207ENST00000481300 IGKV3D-20A0A0C4DH25 116 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 A0A1W2PPR1 153 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 RPL37AP8A6NKH3 93 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 CFLARO15519 480 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 NME2P1O60361 137 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 GALR3O60755 368 aaPredicted RBP3.06□□□□□ -1.92
CBX3-207ENST00000481300 IDH1O75874 414 aaKnown RBP3.06□□□□□ -1.92
CBX3-207ENST00000481300 SYNGR4O95473 234 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 PDGFBP01127 241 aaPredicted RBP3.06□□□□□ -1.92
CBX3-207ENST00000481300 MT-ND1P03886 318 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 HOXD4P09016 255 aaPredicted RBP3.06□□□□□ -1.92
CBX3-207ENST00000481300 CCDC192P0DO97 292 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 ANP32AP39687 249 aaKnown RBP3.06□□□□□ -1.92
CBX3-207ENST00000481300 PGFP49763 221 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 GSK3BP49841 420 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 TKTL1P51854 596 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 WASHC5Q12768 1159 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 PAPPAQ13219 1627 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 KLF5Q13887 457 aaPredicted RBP3.06□□□□□ -1.92
CBX3-207ENST00000481300 BTG3Q14201 252 aaPredicted RBP3.06□□□□□ -1.92
CBX3-207ENST00000481300 RIC1Q4ADV7 1423 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 EPC2Q52LR7 807 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 UNC50Q53HI1 259 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 REP15Q6BDI9 236 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 ZSCAN25Q6NSZ9 544 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 CWC27Q6UX04 472 aaKnown RBP3.06□□□□□ -1.92
CBX3-207ENST00000481300 OLFM4Q6UX06 510 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 BNIPLQ7Z465 357 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 LRRC49Q8IUZ0 686 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 POM121L12Q8N7R1 296 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 RELL2Q8NC24 303 aaPredicted RBP3.06□□□□□ -1.92
CBX3-207ENST00000481300 OR4Q3Q8NH05 313 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 RBM18Q96H35 190 aaKnown RBP3.06□□□□□ -1.92
CBX3-207ENST00000481300 SHANK3Q9BYB0 1731 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 NACA2Q9H009 215 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 GNB4Q9HAV0 340 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 SYTL2Q9HCH5 934 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 HPS4Q9NQG7 708 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 TAS2R16Q9NYV7 291 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 RAI14Q9P0K7 980 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms