RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 PLCXD2Q0VAA5 305 aa18.18■□□□□ 0.5
LIME1-205ENST00000480139 TP53BP2Q13625 1128 aa18.18■□□□□ 0.5
LIME1-205ENST00000480139 MDGA2Q7Z553 956 aa18.18■□□□□ 0.5
LIME1-205ENST00000480139 SPATA21Q7Z572 469 aa18.18■□□□□ 0.5
LIME1-205ENST00000480139 SLC44A2Q8IWA5 706 aaPredicted RBP18.18■□□□□ 0.5
LIME1-205ENST00000480139 PAQR8Q8TEZ7 354 aa18.18■□□□□ 0.5
LIME1-205ENST00000480139 TSPEARQ8WU66 669 aa18.18■□□□□ 0.5
LIME1-205ENST00000480139 OMA1Q96E52 524 aa18.18■□□□□ 0.5
LIME1-205ENST00000480139 SLC35A4Q96G79 324 aa18.18■□□□□ 0.5
LIME1-205ENST00000480139 ITCHQ96J02 903 aa18.18■□□□□ 0.5
LIME1-205ENST00000480139 SLC52A3Q9NQ40 469 aa18.18■□□□□ 0.5
LIME1-205ENST00000480139 EQTNQ9NQ60 294 aa18.18■□□□□ 0.5
LIME1-205ENST00000480139 MAP10Q9P2G4 905 aa18.18■□□□□ 0.5
LIME1-205ENST00000480139 CCDC154A6NI56 674 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 OR6C70A6NIJ9 312 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 TP53I11O14683 189 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 GAB1Q13480 694 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 LASP1Q14847 261 aaKnown RBP18.17■□□□□ 0.5
LIME1-205ENST00000480139 AGKQ53H12 422 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 CDC73Q6P1J9 531 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 NUP54Q7Z3B4 507 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 OR5AK3PQ8NH89 298 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 TMBIM1Q969X1 311 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 VPS33AQ96AX1 596 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 SPDL1Q96EA4 605 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 STACQ99469 402 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 ACTRT3Q9BYD9 372 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 HES7Q9BYE0 225 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 DUSP22Q9NRW4 184 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 CNIH4Q9P003 139 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 VPS4AQ9UN37 437 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 OR10H1Q9Y4A9 318 aa18.17■□□□□ 0.5
LIME1-205ENST00000480139 CHCHD2Q9Y6H1 151 aaPredicted RBP18.17■□□□□ 0.5
LIME1-205ENST00000480139 RFXANKO14593 260 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 TSPAN2O60636 221 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 ALOX5P09917 674 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 ZCCHC18P0CG32 403 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 ACP2P11117 423 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 ADSLP30566 484 aaPredicted RBP18.16■□□□□ 0.5
LIME1-205ENST00000480139 TRPC1P48995 793 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 PNLIPRP2P54317 469 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 RPP38P78345 283 aaKnown RBP18.16■□□□□ 0.5
LIME1-205ENST00000480139 MRPS22P82650 360 aaKnown RBP18.16■□□□□ 0.5
LIME1-205ENST00000480139 SLC22A10Q63ZE4 541 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 SAXO2Q658L1 398 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 TMEM81Q6P7N7 255 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 C6orf120Q7Z4R8 191 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 GALNTL5Q7Z4T8 443 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 CPLX4Q7Z7G2 160 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 PRR22Q8IZ63 422 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 FBXW8Q8N3Y1 598 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 SLC16A11Q8NCK7 471 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 FAM13CQ8NE31 585 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 OR10G3Q8NGC4 313 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 MIPOL1Q8TD10 442 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 GTF2H4Q92759 462 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 NEURL3Q96EH8 262 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 C16orf58Q96GQ5 468 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 PHF12Q96QT6 1004 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 ELAC2Q9BQ52 826 aaKnown RBP18.16■□□□□ 0.5
LIME1-205ENST00000480139 INPP5KQ9BT40 448 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 PIGUQ9H490 435 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 SAR1AQ9NR31 198 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 KLHL1Q9NR64 748 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 SACM1LQ9NTJ5 587 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 LUZP4Q9P127 313 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 MRTO4Q9UKD2 239 aaKnown RBP18.16■□□□□ 0.5
LIME1-205ENST00000480139 CBLCQ9ULV8 474 aa18.16■□□□□ 0.5
LIME1-205ENST00000480139 FAF1Q9UNN5 650 aaPredicted RBP18.16■□□□□ 0.5
LIME1-205ENST00000480139 A0A1W2PP18 115 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 ANKRD33BA6NCL7 494 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 ASPDHA6ND91 283 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 KLRC4-KLRK1H3BQV0 150 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 NR5A2O00482 541 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 SLC22A2O15244 555 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 SNX3O60493 162 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 KCNH1O95259 989 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 RASAL1O95294 804 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 P04436 131 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 CAPN3P20807 821 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 GABRA3P34903 492 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 KRT20P35900 424 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 PIGAP37287 484 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 CDKN2CP42773 168 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 MAN2A2P49641 1150 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 PSMD4P55036 377 aaKnown RBP18.15■□□□□ 0.5
LIME1-205ENST00000480139 FBXW4P57775 412 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 SF3A3Q12874 501 aaKnown RBP eCLIP18.15■□□□□ 0.5
LIME1-205ENST00000480139 EFR3AQ14156 821 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 DUSP5Q16690 384 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 DECR1Q16698 335 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 TBCELQ5QJ74 424 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 WDR53Q7Z5U6 358 aaPredicted RBP18.15■□□□□ 0.5
LIME1-205ENST00000480139 FAM98AQ8NCA5 519 aaKnown RBP18.15■□□□□ 0.5
LIME1-205ENST00000480139 OR4N2Q8NGD1 307 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 SPPL2AQ8TCT8 520 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 GPR151Q8TDV0 419 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 SLC9A6Q92581 669 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 DIO2Q92813 273 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 HGDQ93099 445 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms