RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 C1orf226A1L170 272 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 A8MVJ9 347 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 RTCAO00442 366 aaKnown RBP14.3□□□□□ -0.12
HDLBP-238ENST00000479894 LSM1O15116 133 aaKnown RBP14.3□□□□□ -0.12
HDLBP-238ENST00000479894 HCN1O60741 890 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 SMPD2O60906 423 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 PEX11AO75192 247 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 BMP5P22003 454 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 ERVK-8P63133 956 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 GALNTL6Q49A17 601 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 C6orf136Q5SQH8 315 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 FAM47EQ6ZV65 393 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 TMEM132CQ8N3T6 1108 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 RNF175Q8N4F7 328 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 TMEM251Q8N6I4 163 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 FNDC5Q8NAU1 212 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 B3GNT7Q8NFL0 401 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 PIGTQ969N2 578 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 CHMP6Q96FZ7 201 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 PTCHD1Q96NR3 888 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 PRPF18Q99633 342 aaKnown RBP14.3□□□□□ -0.12
HDLBP-238ENST00000479894 YIPF4Q9BSR8 244 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 AICDAQ9GZX7 198 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 IL1RL2Q9HB29 575 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 SLCO1B3Q9NPD5 702 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 HPF1Q9NWY4 346 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 ASIC5Q9NY37 505 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 MARCOQ9UEW3 520 aaPredicted RBP14.3□□□□□ -0.12
HDLBP-238ENST00000479894 TRIM33Q9UPN9 1127 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 ERVK-11Q9UQG0 969 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 NCKAP5O14513 1909 aa14.3□□□□□ -0.12
HDLBP-238ENST00000479894 KIAA1549Q9HCM3 1950 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 A0A0G2JN53 185 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 TRBV11-1A0A0K0K1C0 115 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 ZNF860A6NHJ4 632 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 POLR3GO15318 223 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-238ENST00000479894 CTNSO60931 367 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 EEDO75530 441 aaKnown RBP14.29□□□□□ -0.12
HDLBP-238ENST00000479894 NR2F6P10588 404 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 ALOX15P16050 662 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-238ENST00000479894 RPL38P63173 70 aaKnown RBP14.29□□□□□ -0.12
HDLBP-238ENST00000479894 TNFRSF17Q02223 184 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 RUNX2Q13950 521 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 SERTAD2Q14140 314 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 TERF2Q15554 542 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 OR52E8Q6IFG1 317 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 MRM1Q6IN84 353 aaKnown RBP14.29□□□□□ -0.12
HDLBP-238ENST00000479894 OGFOD2Q6N063 350 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 ZNF793Q6ZN11 406 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 R3HCC1LQ7Z5L2 792 aaKnown RBP14.29□□□□□ -0.12
HDLBP-238ENST00000479894 FBXW8Q8N3Y1 598 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 NATD1Q8N6N6 113 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 SMPDL3BQ92485 455 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 C11orf24Q96F05 449 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-238ENST00000479894 APIPQ96GX9 242 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 FAM173AQ9BQD7 235 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 PELOQ9BRX2 385 aaKnown RBP14.29□□□□□ -0.12
HDLBP-238ENST00000479894 CCDC28BQ9BUN5 200 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 ZNF717Q9BY31 904 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-238ENST00000479894 RPF2Q9H7B2 306 aaKnown RBP14.29□□□□□ -0.12
HDLBP-238ENST00000479894 AKTIPQ9H8T0 292 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 GIMAP4Q9NUV9 329 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 FAM53CQ9NYF3 392 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 EHD3Q9NZN3 535 aa14.29□□□□□ -0.12
HDLBP-238ENST00000479894 PPIEQ9UNP9 301 aaKnown RBP14.29□□□□□ -0.12
HDLBP-238ENST00000479894 IGKV3D-11A0A0A0MRZ8 115 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 GOLGA8QA0A0J9YX86 632 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 ATP6AP2A0A1C7CYW4 349 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 GOLGA8OA6NCC3 632 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 GOLGA8NF8WBI6 632 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 DYRK3O43781 588 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 ATP6AP2O75787 350 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 F12P00748 615 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-238ENST00000479894 CNR1P21554 472 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 CEACAM8P31997 349 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-238ENST00000479894 MAGEA5P43359 124 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 AQP5P55064 265 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 STX4Q12846 297 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 SLC13A2Q13183 592 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 SLC10A1Q14973 349 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 KIAA0040Q15053 153 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 RPS6KA2Q15349 733 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 NXNQ6DKJ4 435 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 PODNL1Q6PEZ8 512 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 POMZP3Q6PJE2 187 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 EPGNQ6UW88 154 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 SEM1Q6ZVN7 128 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 YTHDF3Q7Z739 585 aaKnown RBP14.28□□□□□ -0.12
HDLBP-238ENST00000479894 NINQ8N4C6 2090 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 OR5T3Q8NGG3 340 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 TMEM158Q8WZ71 300 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 MTERF3Q96E29 417 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 FCRL1Q96LA6 429 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 LDAHQ9H6V9 325 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 MYNNQ9NPC7 610 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 PRTFDC1Q9NRG1 225 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 ALKBH4Q9NXW9 302 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 FBXW2Q9UKT8 454 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 ASB4Q9Y574 426 aa14.28□□□□□ -0.12
HDLBP-238ENST00000479894 HEATR5AQ86XA9 2040 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms