RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 C8orf46Q8TAG6 207 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 FBXO32Q969P5 355 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 PINX1Q96BK5 328 aaKnown RBP6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 ZNF354BQ96LW1 612 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 DCTN5Q9BTE1 182 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 CHMP4BQ9H444 224 aaKnown RBP6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 NIP7Q9Y221 180 aaKnown RBP eCLIP6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 ZNF831Q5JPB2 1677 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 DNAJC9-AS1A6NH13 148 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 WASHC1A8K0Z3 465 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 WASH3PC4AMC7 463 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 H0YL77 283 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 KLF11O14901 512 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 KIAA0513O60268 411 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 ANXA9O76027 345 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 FGF19O95750 216 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 CSF2P04141 144 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 UQCRC2P22695 453 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 MATKP42679 507 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 NAPAP54920 295 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 DSCR9P59020 149 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 PPIAP62937 165 aaKnown RBP6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 ITPK1Q13572 414 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 LINC01620Q4KN68 170 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 FILIP1LQ4L180 1135 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 BLOC1S2Q6QNY1 142 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 WASH2PQ6VEQ5 465 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 USP50Q70EL3 339 aaPredicted RBP6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 GPBP1Q86WP2 473 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 ZNF575Q86XF7 245 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 SLC22A9Q8IVM8 553 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 EFCAB13Q8IY85 973 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 DDHD1Q8NEL9 900 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 OR2T11Q8NH01 316 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 OMA1Q96E52 524 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 SLC41A3Q96GZ6 507 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 HPDLQ96IR7 371 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 FAM218AQ96MZ4 157 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 SIX2Q9NPC8 291 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 MAN2C1Q9NTJ4 1040 aa6.41□□□□□ -1.38
GAPVD1-217ENST00000479511 DLEC1Q9Y238 1755 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 MBLAC1A4D2B0 266 aaPredicted RBP6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 PPIAL4DF5H284 164 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 BUB1O43683 1085 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 B4GALT2O60909 372 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 ANGPTL1O95841 491 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 F7P08709 466 aaPredicted RBP6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 ATP5OP48047 213 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 RIPK4P57078 832 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 RPL27P61353 136 aaKnown RBP6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 PJVKQ0ZLH3 352 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 PARP6Q2NL67 630 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 STEAP1BQ6NZ63 245 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 ZNF841Q6ZN19 808 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 ASRGL1Q7L266 308 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 CCDC36Q8IYA8 594 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 LINC00518Q8N0U6 118 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 NFAM1Q8NET5 270 aaPredicted RBP6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 ZNF671Q8TAW3 534 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 GOLGA5Q8TBA6 731 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 RDH11Q8TC12 318 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 ZPBPQ9BS86 351 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 TBCDQ9BTW9 1192 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 TBC1D10AQ9BXI6 508 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 TDRD1Q9BXT4 1180 aaKnown RBP6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 GSDMCQ9BYG8 508 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 RPAP3Q9H6T3 665 aaPredicted RBP6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 DDX31Q9H8H2 851 aaKnown RBP6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 TRPV5Q9NQA5 729 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 HYPKQ9NX55 129 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 LRP12Q9Y561 859 aa6.4□□□□□ -1.38
GAPVD1-217ENST00000479511 KIF16BQ96L93 1317 aa6.4□□□□□ -1.39
GAPVD1-217ENST00000479511 GREB1LQ9C091 1923 aaPredicted RBP6.4□□□□□ -1.39
GAPVD1-217ENST00000479511 COL3A1P02461 1466 aaPredicted RBP6.4□□□□□ -1.39
GAPVD1-217ENST00000479511 LAMB4A4D0S4 1761 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 PAPPA2Q9BXP8 1791 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 MSGN1A6NI15 193 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 NKX6-3A6NJ46 265 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 OR1F1O43749 312 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 BCAS1O75363 584 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 ERLIN1O75477 346 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 FCER2P06734 321 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 CPN1P15169 458 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 CEBPBP17676 345 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 CSNK2BP67870 215 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 CDKN3Q16667 212 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 C9orf57Q5W0N0 161 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 TTC23Q5W5X9 447 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 CCBE1Q6UXH8 406 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 ZNF730Q6ZMV8 503 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 CENPUQ71F23 418 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 Q71RC1 249 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 CENPQQ7L2Z9 268 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 TAS2R42Q7RTR8 314 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 NFE4Q86UQ8 179 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 LUZP1Q86V48 1076 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 METTL27Q8N6F8 245 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 DMBX1Q8NFW5 382 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 OR5M9Q8NGP3 310 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms