RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 C21orf58P58505 322 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 KCNJ2P63252 427 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 PRR5P85299 388 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 ALDH6A1Q02252 535 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 PLGLB1Q02325 96 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 MRPL49Q13405 166 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 NTRK2Q16620 822 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CT45A2Q5DJT8 189 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 DESI1Q6ICB0 168 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 RGS9BPQ6ZS82 235 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 GALNT10Q86SR1 603 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 SLC34A3Q8N130 599 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 OR4N2Q8NGD1 307 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 OR4A15Q8NGL6 344 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 FAR1Q8WVX9 515 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 SLC9A6Q92581 669 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 DIO2Q92813 273 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 EFHD2Q96C19 240 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 COQ8BQ96D53 544 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 FAM120BQ96EK7 910 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 HSPBAP1Q96EW2 488 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 FRMD6Q96NE9 622 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CXorf36Q9H7Y0 433 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 METTL7AQ9H8H3 244 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 C3orf14Q9HBI5 128 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 NEUROD4Q9HD90 331 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 SIRT3Q9NTG7 399 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 FGFR1OP2Q9NVK5 253 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 MAPRE3Q9UPY8 281 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 GPR55Q9Y2T6 319 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 GPR45Q9Y5Y3 372 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CHCHD2Q9Y6H1 151 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 USP9YO00507 2555 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 PCNX1Q96RV3 2341 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 FLNBO75369 2602 aaKnown RBP6.34□□□□□ -1.39
BRCA1-215ENST00000478531 PINLYPA6NC86 204 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 NPIPA5E9PKD4 350 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 EMC8O43402 210 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 CDC40O60508 579 aaKnown RBP eCLIP6.34□□□□□ -1.39
BRCA1-215ENST00000478531 REM1O75628 298 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 PPM1BO75688 479 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 PSMG1O95456 288 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 CPSF4O95639 269 aaKnown RBP6.34□□□□□ -1.39
BRCA1-215ENST00000478531 DRD5P21918 477 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 MST1P26927 711 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 IL12AP29459 219 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 S100A3P33764 101 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 STX1BP61266 288 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 HBA1P69905 142 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 ELOAQ14241 798 aaKnown RBP6.34□□□□□ -1.39
BRCA1-215ENST00000478531 LASP1Q14847 261 aaKnown RBP6.34□□□□□ -1.39
BRCA1-215ENST00000478531 DPY19L1Q2PZI1 675 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 RNFT1Q5M7Z0 435 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 SLC22A10Q63ZE4 541 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 GK5Q6ZS86 529 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 CAMKMTQ7Z624 323 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 DND1Q8IYX4 353 aaKnown RBP6.34□□□□□ -1.39
BRCA1-215ENST00000478531 CLEC4FQ8N1N0 589 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 MIER2Q8N344 545 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 FBXW8Q8N3Y1 598 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 OR2M7Q8NG81 312 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 OR8J2Q8NGG1 315 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 OR9I1Q8NGQ6 314 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 RFWD2Q8NHY2 731 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 GPR151Q8TDV0 419 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 PAQR8Q8TEZ7 354 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 OR5P2Q8WZ92 322 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 PIK3R3Q92569 461 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 NR4A3Q92570 626 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 TESCQ96BS2 214 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 RMND5BQ96G75 393 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-215ENST00000478531 RILPQ96NA2 401 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 ADOQ96SZ5 270 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 DOHHQ9BU89 302 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 Q9N2J8 555 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 PLSCR2Q9NRY7 297 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 KLRF1Q9NZS2 232 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 NPIPA1Q9UND3 350 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 MED12Q93074 2177 aa6.34□□□□□ -1.39
BRCA1-215ENST00000478531 CRYBG3Q68DQ2 2970 aa6.34□□□□□ -1.4
BRCA1-215ENST00000478531 DOPEY2Q9Y3R5 2298 aa6.34□□□□□ -1.4
BRCA1-215ENST00000478531 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 RNF103-CHMP3A0A140T963 221 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 GXYLT2A0PJZ3 443 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ASPDHA6ND91 283 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ANKUB1A6NFN9 424 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 RNASET2O00584 256 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 DYNC1I1O14576 645 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 HS6ST1O60243 411 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 UGT2B11O75310 529 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 SLC22A3O75751 556 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 UNC5CO95185 931 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 HMGN2P05204 90 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 PGRP06401 933 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ACP2P11117 423 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 GABRA3P34903 492 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 MASP1P48740 699 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 CCT3P49368 545 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 CASP9P55211 416 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 WNT3P56703 355 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms