RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 S100A13Q99584 98 aa11.29□□□□□ -0.6
PCCB-214ENST00000478469 TREX2Q9BQ50 279 aaPredicted RBP11.29□□□□□ -0.6
PCCB-214ENST00000478469 ZNF559Q9BR84 538 aa11.29□□□□□ -0.6
PCCB-214ENST00000478469 BTBD2Q9BX70 525 aa11.29□□□□□ -0.6
PCCB-214ENST00000478469 PINK1Q9BXM7 581 aa11.29□□□□□ -0.6
PCCB-214ENST00000478469 USP36Q9P275 1121 aaKnown RBP11.29□□□□□ -0.6
PCCB-214ENST00000478469 MBD1Q9UIS9 605 aaPredicted RBP11.29□□□□□ -0.6
PCCB-214ENST00000478469 COMMD3-BMI1R4GMX3 469 aa11.29□□□□□ -0.6
PCCB-214ENST00000478469 ARHGAP33O14559 1287 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 MYF5P13349 255 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 ETS2P15036 469 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 CBLP22681 906 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 IST1P53990 364 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 DCAF7P61962 342 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 ZXDAP98168 799 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 LTB4RQ15722 352 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 YOD1Q5VVQ6 348 aaPredicted RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 ADGRG5Q8IZF4 528 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 IPCEF1Q8WWN9 437 aaPredicted RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 UTP4Q969X6 686 aaKnown RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 ZNF300Q96RE9 604 aaPredicted RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 A0A1W2PR48 441 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 SNAP29O95721 258 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 EPHA4P54764 986 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 ZP2Q05996 745 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 CRYZQ08257 329 aaKnown RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 PIN1Q13526 163 aaPredicted RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 TMEM71Q6P5X7 295 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 PGM2L1Q6PCE3 622 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 PAPD4Q6PIY7 484 aaKnown RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 PAQR7Q86WK9 346 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 KMT5CQ86Y97 462 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 TCEANCQ8N8B7 351 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 EFHD2Q96C19 240 aaPredicted RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 SPNS1Q9H2V7 528 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 R4GN57 208 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 ASXL3Q9C0F0 2248 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 NPIPA5A0A0B4J1W7 369 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 NPIPA7E9PJI5 369 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 NPIPA5E9PKD4 350 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 FAM227AF5H4B4 570 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 FLRT2O43155 660 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 CDC40O60508 579 aaKnown RBP eCLIP11.28□□□□□ -0.6
PCCB-214ENST00000478469 NSA2O95478 260 aaKnown RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 ETHE1O95571 254 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 CLIC3O95833 236 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 NPIPA8P0DM63 369 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 DBTP11182 482 aaKnown RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 NR2C1P13056 603 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 CA5AP35218 305 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 SLC9A3P48764 834 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 NUDT6P53370 316 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 IL18R1Q13478 541 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 TLR1Q15399 786 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 SPANXN2Q5MJ10 180 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 SLC35F1Q5T1Q4 408 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 SLC27A4Q6P1M0 643 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 DNM1P34Q6PK57 102 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 C16orf58Q96GQ5 468 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 YTHDF1Q9BYJ9 559 aaKnown RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 SLC6A20Q9NP91 592 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 RIMS3Q9UJD0 308 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 PRDM4Q9UKN5 801 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 CBLCQ9ULV8 474 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 NPIPA1Q9UND3 350 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 ASCC3Q8N3C0 2202 aaKnown RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 DAPL1A0PJW8 107 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 FRS3O43559 492 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 GALR3O60755 368 aaPredicted RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 OXSR1O95747 527 aaPredicted RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 MYL9P24844 172 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 PON3Q15166 354 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 C3orf38Q5JPI3 329 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 TMEM225Q6GV28 225 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 ZCCHC12Q6PEW1 402 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 LAPTM4BQ86VI4 370 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 PIK3R3Q92569 461 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 ELP4Q96EB1 424 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 SPRTNQ9H040 489 aaPredicted RBP11.28□□□□□ -0.6
PCCB-214ENST00000478469 CXorf56Q9H5V9 222 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 PRDM9Q9NQV7 894 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 PPT2Q9UMR5 302 aa11.28□□□□□ -0.6
PCCB-214ENST00000478469 CDC14CA4D256 554 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 VSTM2BA6NLU5 285 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 SNX4O95219 450 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 RASAL1O95294 804 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 BMP2P12643 396 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 STARD6P59095 220 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 PTGES3Q15185 160 aaKnown RBP11.27□□□□□ -0.6
PCCB-214ENST00000478469 TPRG1LQ5T0D9 272 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 CBLL1Q75N03 491 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 ADGRF3Q8IZF5 1079 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 TMEM151AQ8N4L1 468 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 CLEC1AQ8NC01 280 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 NEURL3Q96EH8 262 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 FBXL20Q96IG2 436 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 PAIP1Q9H074 479 aaKnown RBP11.27□□□□□ -0.6
PCCB-214ENST00000478469 NANSQ9NR45 359 aa11.27□□□□□ -0.6
PCCB-214ENST00000478469 RSL24D1Q9UHA3 163 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms