RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 TSSK3Q96PN8 268 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 ASIC5Q9NY37 505 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 NPFFR2Q9Y5X5 522 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 DNAJC13O75165 2243 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 PCNX1Q96RV3 2341 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 C2orf72A6NCS6 295 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 MYO1GB0I1T2 1018 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 GP1BBP13224 206 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 IDO1P14902 403 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 ABCD3P28288 659 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 PLGLB1Q02325 96 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 HEPACAMQ14CZ8 416 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 RPS6KA2Q15349 733 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 KRTCAP3Q53RY4 240 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 IL23RQ5VWK5 629 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 SLC22A10Q63ZE4 541 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 Q6ZPB1 254 aaPredicted RBP16.2■□□□□ 0.18
PTPN7-209ENST00000477554 DOLPP1Q86YN1 238 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 OR4N2Q8NGD1 307 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 SGCZQ96LD1 299 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 FAM173AQ9BQD7 235 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 GLIPR2Q9H4G4 154 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 ZDHHC11Q9H8X9 412 aa16.2■□□□□ 0.18
PTPN7-209ENST00000477554 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.2■□□□□ 0.18
PTPN7-209ENST00000477554 NCOA6Q14686 2063 aaPredicted RBP16.2■□□□□ 0.18
PTPN7-209ENST00000477554 P04436 131 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 ALDOCP09972 364 aaKnown RBP16.19■□□□□ 0.18
PTPN7-209ENST00000477554 ENDOUP21128 410 aaKnown RBP16.19■□□□□ 0.18
PTPN7-209ENST00000477554 MC3RP41968 323 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 GSTM5P46439 218 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 ATP4BP51164 291 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 STX1BP61266 288 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 EMC4Q5J8M3 183 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 FNDC7Q5VTL7 733 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 TMEM198Q66K66 360 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 TMEM107Q6UX40 140 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 ZNF551Q7Z340 670 aaPredicted RBP16.19■□□□□ 0.18
PTPN7-209ENST00000477554 MTDHQ86UE4 582 aaKnown RBP16.19■□□□□ 0.18
PTPN7-209ENST00000477554 GHDCQ8N2G8 530 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 FBXW8Q8N3Y1 598 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 MARVELD2Q8N4S9 558 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 SLC15A4Q8N697 577 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 POGLUT1Q8NBL1 392 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 C7orf57Q8NEG2 295 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 ZNF675Q8TD23 568 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 ITLN2Q8WWU7 325 aaPredicted RBP16.19■□□□□ 0.18
PTPN7-209ENST00000477554 TP53INP1Q96A56 240 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 MAGED4Q96JG8 741 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 LRRC37BQ96QE4 947 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 NODALQ96S42 347 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 C1orf50Q9BV19 199 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 PLSCR2Q9NRY7 297 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 PSME2Q9UL46 239 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.19■□□□□ 0.18
PTPN7-209ENST00000477554 B4DXG7 233 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 ABCB1P08183 1280 aaPredicted RBP16.19■□□□□ 0.18
PTPN7-209ENST00000477554 CT45A8P0DMV1 189 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 CT45A9P0DMV2 189 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 BCKDHAP12694 445 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 PTGDSP41222 190 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 NCBP2P52298 156 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTPN7-209ENST00000477554 SQLEQ14534 574 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 CT45A2Q5DJT8 189 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 HLA-DQA1Q5Y7H0 255 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 ZNF787Q6DD87 383 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 CD163Q86VB7 1156 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 SPPL2AQ8TCT8 520 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 HGDQ93099 445 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 OMA1Q96E52 524 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 JSRP1Q96MG2 331 aaPredicted RBP16.19■□□□□ 0.18
PTPN7-209ENST00000477554 VSTM2LQ96N03 204 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 AMDHD1Q96NU7 426 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 BBS4Q96RK4 519 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 IL1RL2Q9HB29 575 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 GALNT9Q9HCQ5 603 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 AIG1Q9NVV5 245 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 ENTPD4Q9Y227 616 aa16.19■□□□□ 0.18
PTPN7-209ENST00000477554 WBP11Q9Y2W2 641 aaKnown RBP16.19■□□□□ 0.18
PTPN7-209ENST00000477554 UGT2B11O75310 529 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 ABOP16442 354 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 GRNP28799 593 aaKnown RBP16.18■□□□□ 0.18
PTPN7-209ENST00000477554 ADSLP30566 484 aaPredicted RBP16.18■□□□□ 0.18
PTPN7-209ENST00000477554 ASMTP46597 345 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 MRPL19P49406 292 aaKnown RBP16.18■□□□□ 0.18
PTPN7-209ENST00000477554 DIO3P55073 304 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 KCNJ2P63252 427 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 C6orf163Q5TEZ5 329 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 TAGAPQ8N103 731 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 LIX1Q8N485 282 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 DIO2Q92813 273 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 TMBIM1Q969X1 311 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 NTNG2Q96CW9 530 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 LCORQ96JN0 433 aaPredicted RBP16.18■□□□□ 0.18
PTPN7-209ENST00000477554 NMUR2Q9GZQ4 415 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 ZNF703Q9H7S9 590 aaPredicted RBP16.18■□□□□ 0.18
PTPN7-209ENST00000477554 FOLH1BQ9HBA9 442 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.18■□□□□ 0.18
PTPN7-209ENST00000477554 SPRR3Q9UBC9 169 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 MAPRE3Q9UPY8 281 aa16.18■□□□□ 0.18
PTPN7-209ENST00000477554 GPR55Q9Y2T6 319 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms