RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PSG6Q00889 435 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 MFAP5Q13361 173 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 CDC73Q6P1J9 531 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 C6orf120Q7Z4R8 191 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 RNF130Q86XS8 419 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 SLC44A2Q8IWA5 706 aaPredicted RBP14.16□□□□□ -0.14
SEC13-215ENST00000477547 ZFP90Q8TF47 636 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 C16orf58Q96GQ5 468 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 LCORQ96JN0 433 aaPredicted RBP14.16□□□□□ -0.14
SEC13-215ENST00000477547 PHF12Q96QT6 1004 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 ACTRT3Q9BYD9 372 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 SERHL2Q9H4I8 314 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 EPS8L2Q9H6S3 715 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 ZNF552Q9H707 407 aaPredicted RBP14.16□□□□□ -0.14
SEC13-215ENST00000477547 Q9N2J8 555 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 VAPAQ9P0L0 249 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 SLAMF8Q9P0V8 285 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 OR10H1Q9Y4A9 318 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 PCDHB14Q9Y5E9 798 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 PCDHGA9Q9Y5G4 932 aaKnown RBP14.16□□□□□ -0.14
SEC13-215ENST00000477547 UBR5O95071 2799 aaPredicted RBP14.16□□□□□ -0.14
SEC13-215ENST00000477547 TRBV5-3A0A0A0MS03 114 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 TTC36A6NLP5 189 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 FXYD1O00168 92 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 AIM2O14862 343 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 NADKO95544 446 aaPredicted RBP14.15□□□□□ -0.14
SEC13-215ENST00000477547 C1QCP02747 245 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 ALOX5P09917 674 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 FAM87AP0C7U9 286 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 PPICP45877 212 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 CPA2P48052 419 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 NUDT2P50583 147 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 SSR4P51571 173 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 CASP9P55211 416 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 NRG3P56975 720 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 PLCXD2Q0VAA5 305 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 CAPRIN1Q14444 709 aaKnown RBP14.15□□□□□ -0.14
SEC13-215ENST00000477547 DUSP5Q16690 384 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 TNFAIP8L2Q6P589 184 aaPredicted RBP14.15□□□□□ -0.14
SEC13-215ENST00000477547 ZCCHC12Q6PEW1 402 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 DLEU7Q6UYE1 221 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 TRPM8Q7Z2W7 1104 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 PRR22Q8IZ63 422 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 TAGAPQ8N103 731 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 COX18Q8N8Q8 333 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 OR5D16Q8NGK9 328 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 ASB15Q8WXK1 588 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 HOXB13Q92826 284 aaPredicted RBP14.15□□□□□ -0.14
SEC13-215ENST00000477547 TP53INP1Q96A56 240 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 RASL10BQ96S79 203 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 CGREF1Q99674 301 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 CPPED1Q9BRF8 314 aaPredicted RBP14.15□□□□□ -0.14
SEC13-215ENST00000477547 SLC39A3Q9BRY0 314 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 OR51I1Q9H343 314 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 TPT1P8Q9HAU6 139 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 ARL8BQ9NVJ2 186 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 MAP10Q9P2G4 905 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 TAGLN3Q9UI15 199 aa14.15□□□□□ -0.14
SEC13-215ENST00000477547 GPR55Q9Y2T6 319 aaPredicted RBP14.15□□□□□ -0.14
SEC13-215ENST00000477547 YARS2Q9Y2Z4 477 aaKnown RBP14.15□□□□□ -0.14
SEC13-215ENST00000477547 CLIC1O00299 241 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 ACOX3O15254 700 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 NKX2-2O95096 273 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 CBX6O95503 412 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 CT45A8P0DMV1 189 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 CT45A9P0DMV2 189 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 DRD5P21918 477 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 PPIBP23284 216 aaKnown RBP14.15□□□□□ -0.15
SEC13-215ENST00000477547 CASRP41180 1078 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 SOX3P41225 446 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 ST13P50502 369 aaKnown RBP14.15□□□□□ -0.15
SEC13-215ENST00000477547 ANXA11P50995 505 aaKnown RBP14.15□□□□□ -0.15
SEC13-215ENST00000477547 KCNAB2Q13303 367 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 CT45A2Q5DJT8 189 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 EXOSC6Q5RKV6 272 aaKnown RBP14.15□□□□□ -0.15
SEC13-215ENST00000477547 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.15□□□□□ -0.15
SEC13-215ENST00000477547 TMEM156Q8N614 296 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 SLC16A11Q8NCK7 471 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 GPR151Q8TDV0 419 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 ADAMTS15Q8TE58 950 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 CDS1Q92903 461 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 HSPBAP1Q96EW2 488 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 RMND5BQ96G75 393 aaPredicted RBP14.15□□□□□ -0.15
SEC13-215ENST00000477547 OR7D2Q96RA2 312 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 LMF1Q96S06 567 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 STACQ99469 402 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 SMAD5Q99717 465 aaKnown RBP14.15□□□□□ -0.15
SEC13-215ENST00000477547 RAD21L1Q9H4I0 556 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 GID8Q9NWU2 228 aa14.15□□□□□ -0.15
SEC13-215ENST00000477547 TO15178 435 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 ZNF354AO60765 605 aaPredicted RBP14.14□□□□□ -0.15
SEC13-215ENST00000477547 F10P00742 488 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 MATN1P21941 496 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 ABCD3P28288 659 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 GABRA3P34903 492 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 TRHRP34981 398 aaPredicted RBP14.14□□□□□ -0.15
SEC13-215ENST00000477547 KRT20P35900 424 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 MAP3K8P41279 467 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 TMED10P49755 219 aaKnown RBP14.14□□□□□ -0.15
SEC13-215ENST00000477547 MTPNP58546 118 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms