RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 NME6O75414 186 aaPredicted RBP14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 RB1P06400 928 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 NNMTP40261 264 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 MTNR1AP48039 350 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 PITPNBP48739 271 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 RPS24P62847 133 aaKnown RBP14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 DHODHQ02127 395 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 MAP4K2Q12851 820 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 C9orf50Q5SZB4 431 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 SHEQ5VZ18 495 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 RAET1GQ6H3X3 334 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 TPGS1Q6ZTW0 290 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 RRM2BQ7LG56 351 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 WDR53Q7Z5U6 358 aaPredicted RBP14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 BCDIN3DQ7Z5W3 292 aaKnown RBP14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 PM20D2Q8IYS1 436 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 LINC00518Q8N0U6 118 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 KREMEN2Q8NCW0 462 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 OR52N1Q8NH53 320 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 PPCDCQ96CD2 204 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 REG4Q9BYZ8 158 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 BTBD1Q9H0C5 482 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 SGK2Q9HBY8 427 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 BAIAP2Q9UQB8 552 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 KCNMB2Q9Y691 235 aa14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 DNMT3AQ9Y6K1 912 aaPredicted RBP14.39□□□□□ -0.11
CLSTN1-205ENST00000477264 HIDE1A8MVS5 230 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 UPK3BL1B0FP48 263 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 UPK3BL2E5RIL1 263 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 C5orf67F2Z3F1 127 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 TGM6O95932 706 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 C8AP07357 584 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 IGFBP1P08833 259 aaPredicted RBP14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 CHRM5P08912 532 aaPredicted RBP14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 LIMS3P0CW19 117 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 LIMS4P0CW20 117 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 HOXB1P14653 301 aaPredicted RBP14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 GLULP15104 373 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 MYOGP15173 224 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 KELP23276 732 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 WEE1P30291 646 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 DGKEP52429 567 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 BDH1Q02338 343 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 BTN1A1Q13410 526 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 DOC2AQ14183 400 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 GINS1Q14691 196 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 RNF219Q5W0B1 726 aaPredicted RBP14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 LILRA6Q6PI73 481 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 OAFQ86UD1 273 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 DENND1CQ8IV53 801 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 LRRC56Q8IYG6 542 aaPredicted RBP14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 OR6C4Q8NGE1 309 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 LILRB1Q8NHL6 650 aaPredicted RBP14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 ZNF436Q9C0F3 470 aaPredicted RBP14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 MYNNQ9NPC7 610 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 IFT46Q9NQC8 304 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 IMP3Q9NV31 184 aaKnown RBP14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 POMT2Q9UKY4 750 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 SCML1Q9UN30 329 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 MAP4K5Q9Y4K4 846 aa14.38□□□□□ -0.11
CLSTN1-205ENST00000477264 TRAV6A0A075B6T7 132 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 KDM4EB2RXH2 506 aaPredicted RBP14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 AGRPO00253 132 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 COCHO43405 550 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 CD160O95971 181 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 FURINP09958 794 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 ZNF8P17098 575 aaPredicted RBP14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 UQCRC2P22695 453 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 SLC1A3P43003 542 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 MAPK8P45983 427 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 SLC5A12Q1EHB4 618 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 ASB18Q6ZVZ8 466 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 BTN2A1Q7KYR7 527 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 GET4Q7L5D6 327 aaPredicted RBP14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 MRGPREQ86SM8 312 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 THOC6Q86W42 341 aaKnown RBP14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 CMIPQ8IY22 773 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 KLHL36Q8N4N3 616 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 SKA2Q8WVK7 121 aaPredicted RBP14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 FBXW5Q969U6 566 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 COQ10AQ96MF6 247 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 ZMAT5Q9UDW3 170 aaKnown RBP14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 IGLV3-16A0A075B6K0 115 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 GRXCR1A8MXD5 290 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 SOCS5O75159 536 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 ITGA10O75578 1167 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 RGS9O75916 674 aaPredicted RBP14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 CA3P07451 260 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 CXCL3P19876 107 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 RAB3AP20336 220 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 NPR2P20594 1047 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 SOAT1P35610 550 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 GIPRP48546 466 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 NHLRC3Q5JS37 347 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 TCTN3Q6NUS6 607 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 LIPIQ6XZB0 460 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 IQCF1Q8N6M8 205 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 POGLUT1Q8NBL1 392 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 OR4K1Q8NGD4 311 aa14.37□□□□□ -0.11
CLSTN1-205ENST00000477264 OR6M1Q8NGM8 313 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms