RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 NRG3P56975 720 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 DCAF7P61962 342 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 HBA1P69905 142 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 FOXO1Q12778 655 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 GAB1Q13480 694 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 MLC1Q15049 377 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 RPS6KA2Q15349 733 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 LSM12Q3MHD2 195 aaKnown RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 SPANXN4Q5MJ08 99 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 CAMKMTQ7Z624 323 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 ANKRD46Q86W74 232 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 CHERPQ8IWX8 916 aaKnown RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 SLC34A3Q8N130 599 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 CLEC4FQ8N1N0 589 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 ZFP62Q8NB50 900 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 NUP43Q8NFH3 380 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 ZFP28Q8NHY6 868 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 FBXO30Q8TB52 745 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 PRR7Q8TB68 274 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 ACTRT2Q8TDY3 377 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 PIK3R3Q92569 461 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 DIO2Q92813 273 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 HOXB13Q92826 284 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 EFHD2Q96C19 240 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 NTNG2Q96CW9 530 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 THOC1Q96FV9 657 aaKnown RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 OTUB1Q96FW1 271 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 ADOQ96SZ5 270 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 FAM173AQ9BQD7 235 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 YIPF4Q9BSR8 244 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 LMF2Q9BU23 707 aaKnown RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 TTTY12Q9BZ98 90 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 DPY30Q9C005 99 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 BHLHE41Q9C0J9 482 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 CLMPQ9H6B4 373 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 FLRT3Q9NZU0 649 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 NTMQ9P121 344 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 HRH3Q9Y5N1 445 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 GPR45Q9Y5Y3 372 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 C2orf72A6NCS6 295 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 LRRC3CA6NJW4 275 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 C17orf51A8MQB3 221 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 ACOX3O15254 700 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 ASNA1O43681 348 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 SEMA7AO75326 666 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 REM1O75628 298 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 PDE9AO76083 593 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 IGKV1D-16P01601 117 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 CELA3AP09093 270 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 IFI6P09912 130 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 RFPL3SP0C7P2 107 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 RNF224P0DH78 156 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 ACP2P11117 423 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 NAGAP17050 411 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 MAP3K8P41279 467 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 CASP3P42574 277 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 IDH3AP50213 366 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 DGKQP52824 942 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 AQP5P55064 265 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 FAM174BQ3ZCQ3 159 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 CMPK2Q5EBM0 449 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 EXOSC6Q5RKV6 272 aaKnown RBP8.89□□□□□ -0.99
HDAC3-208ENST00000476739 FNDC7Q5VTL7 733 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 GFRALQ6UXV0 394 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 RGS9BPQ6ZS82 235 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 SZRD1Q7Z422 152 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 SPATA19Q7Z5L4 167 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 FGD2Q7Z6J4 655 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 GALNT10Q86SR1 603 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 DND1Q8IYX4 353 aaKnown RBP8.89□□□□□ -0.99
HDAC3-208ENST00000476739 TMEM251Q8N6I4 163 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 SLC16A11Q8NCK7 471 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 OR8J2Q8NGG1 315 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 OR5AK3PQ8NH89 298 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 PSMA8Q8TAA3 256 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 OR5P2Q8WZ92 322 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 TESCQ96BS2 214 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 SLC35A4Q96G79 324 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 JSRP1Q96MG2 331 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-208ENST00000476739 GPR137Q96N19 417 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 PRPF18Q99633 342 aaKnown RBP8.89□□□□□ -0.99
HDAC3-208ENST00000476739 DEFB127Q9H1M4 99 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 GALNT9Q9HCQ5 603 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 ATAD3AQ9NVI7 634 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 SEC14L3Q9UDX4 400 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 OSGIN2Q9Y236 505 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 SNX8Q9Y5X2 465 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 LIPGQ9Y5X9 500 aa8.89□□□□□ -0.99
HDAC3-208ENST00000476739 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.89□□□□□ -0.99
HDAC3-208ENST00000476739 HELZ2Q9BYK8 2649 aaKnown RBP8.88□□□□□ -0.99
HDAC3-208ENST00000476739 CLEC18AA5D8T8 446 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 OR6C70A6NIJ9 312 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 CAPN14A8MX76 684 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 B4DXG7 233 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 E9PBE3 544 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 H0YHG0 523 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 RNASET2O00584 256 aaKnown RBP8.88□□□□□ -0.99
HDAC3-208ENST00000476739 ADAM10O14672 748 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 TP53I11O14683 189 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 TFECO14948 347 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms