RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 SLC44A2Q8IWA5 706 aaPredicted RBP9.36□□□□□ -0.91
CCM2-208ENST00000476594 CHERPQ8IWX8 916 aaKnown RBP9.36□□□□□ -0.91
CCM2-208ENST00000476594 OR5M9Q8NGP3 310 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 OR10Q1Q8NGQ4 319 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 CEP70Q8NHQ1 597 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCM2-208ENST00000476594 TMBIM1Q969X1 311 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 MARVELD3Q96A59 401 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 SLC35A4Q96G79 324 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 VSTM2LQ96N03 204 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 ZIM3Q96PE6 472 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 MECRQ9BV79 373 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 SDHAF3Q9NRP4 125 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 ALKBH4Q9NXW9 302 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 SH3BP4Q9P0V3 963 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 C19orf53Q9UNZ5 99 aaPredicted RBP9.36□□□□□ -0.91
CCM2-208ENST00000476594 EIF3LQ9Y262 564 aaKnown RBP9.36□□□□□ -0.91
CCM2-208ENST00000476594 DTX4Q9Y2E6 619 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 C15orf41Q9Y2V0 281 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 DNAJC13O75165 2243 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 AHRRA9YTQ3 701 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 GNB5O14775 395 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 SNPHO15079 494 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 LSM1O15116 133 aaKnown RBP9.35□□□□□ -0.91
CCM2-208ENST00000476594 TYROBPO43914 113 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 WISP2O76076 250 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 SOX30O94993 753 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 LRATO95237 230 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 SERPINE1P05121 402 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 HPNP05981 417 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 CHRNGP07510 517 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 PRPS2P11908 318 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 SDC1P18827 310 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 COL8A1P27658 744 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 MC3RP41968 323 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 CDK9P50750 372 aaKnown RBP9.35□□□□□ -0.91
CCM2-208ENST00000476594 MANFP55145 182 aaKnown RBP9.35□□□□□ -0.91
CCM2-208ENST00000476594 PRR5P85299 388 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 DUSP2Q05923 314 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 ZNF844Q08AG5 666 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 DUSP8Q13202 625 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 RCAN2Q14206 197 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 KIAA0040Q15053 153 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 C1orf185Q5T7R7 199 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 ZNF787Q6DD87 383 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 HIST2H2BCQ6DN03 193 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 AAGABQ6PD74 315 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 Q6ZSR9 355 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 ZCCHC23Q6ZST2 131 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 SZRD1Q7Z422 152 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 GDF7Q7Z4P5 450 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 OR2L13Q8N349 312 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 FNDC5Q8NAU1 212 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 OR7G2Q8NG99 324 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 AGR3Q8TD06 166 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 HGDQ93099 445 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 GFM2Q969S9 779 aaKnown RBP9.35□□□□□ -0.91
CCM2-208ENST00000476594 FCRL1Q96LA6 429 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 AMDHD1Q96NU7 426 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 TSSK3Q96PN8 268 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 PCNX1Q96RV3 2341 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 SLC6A15Q9H2J7 730 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 GLIPR2Q9H4G4 154 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 KCNK9Q9NPC2 374 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 KCNJ16Q9NPI9 418 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 PNPLA3Q9NST1 481 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 ACSS1Q9NUB1 689 aaPredicted RBP9.35□□□□□ -0.91
CCM2-208ENST00000476594 CBLCQ9ULV8 474 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 EXO1Q9UQ84 846 aaKnown RBP9.35□□□□□ -0.91
CCM2-208ENST00000476594 CCL27Q9Y4X3 112 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 LIPGQ9Y5X9 500 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 ZNF407Q9C0G0 2248 aa9.35□□□□□ -0.91
CCM2-208ENST00000476594 CENPEQ02224 2701 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 ADAM10O14672 748 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 AKAP10O43572 662 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 ICOSLGO75144 302 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 PEX11AO75192 247 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 UGT2B11O75310 529 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 SKAP2O75563 359 aaPredicted RBP9.34□□□□□ -0.91
CCM2-208ENST00000476594 ACTL6AO96019 429 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 KRT16P08779 473 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 CELA3AP09093 270 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 RFPL3SP0C7P2 107 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 CT45A8P0DMV1 189 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 CT45A9P0DMV2 189 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 PEX19P40855 299 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 ETV4P43268 484 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 ZFP36L2P47974 494 aaKnown RBP9.34□□□□□ -0.91
CCM2-208ENST00000476594 SERPINB4P48594 390 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 TRPC1P48995 793 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 PMPCAQ10713 525 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 HSPB3Q12988 150 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 SMU1Q2TAY7 513 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 RFTN2Q52LD8 501 aaPredicted RBP9.34□□□□□ -0.91
CCM2-208ENST00000476594 CT45A2Q5DJT8 189 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 PLCZ1Q86YW0 608 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 CDRT4Q8N9R6 151 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 OR4K17Q8NGC6 315 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 OR14L1PQ8NHC6 308 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 TUBGCP3Q96CW5 907 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms