RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 VSTM2LQ96N03 204 aa12.66□□□□□ -0.38
SOD1-204ENST00000476106 OR52E6Q96RD3 313 aa12.66□□□□□ -0.38
SOD1-204ENST00000476106 CCDC134Q9H6E4 229 aa12.66□□□□□ -0.38
SOD1-204ENST00000476106 C3orf14Q9HBI5 128 aa12.66□□□□□ -0.38
SOD1-204ENST00000476106 NEUROD4Q9HD90 331 aa12.66□□□□□ -0.38
SOD1-204ENST00000476106 TIMMDC1Q9NPL8 285 aa12.66□□□□□ -0.38
SOD1-204ENST00000476106 PCDHGB4Q9UN71 923 aa12.66□□□□□ -0.38
SOD1-204ENST00000476106 COPG1Q9Y678 874 aaKnown RBP12.66□□□□□ -0.38
SOD1-204ENST00000476106 RP1L1Q8IWN7 2480 aaPredicted RBP12.66□□□□□ -0.38
SOD1-204ENST00000476106 RNF103-CHMP3A0A140T963 221 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 FRG2CA6NGY1 282 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 PLOD2O00469 737 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 NME2P1O60361 137 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 PGRP06401 933 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 SP1P08047 785 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 NME2P22392 152 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 ABCD3P28288 659 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 IL12BP29460 328 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 CCT3P49368 545 aaKnown RBP12.65□□□□□ -0.38
SOD1-204ENST00000476106 MEOX1P50221 254 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 POLR2JP52435 117 aaKnown RBP12.65□□□□□ -0.38
SOD1-204ENST00000476106 CASP9P55211 416 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 GNGT1P63211 74 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 LASP1Q14847 261 aaKnown RBP12.65□□□□□ -0.38
SOD1-204ENST00000476106 BICRALQ6AI39 1079 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 DESI1Q6ICB0 168 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 SLC25A25Q6KCM7 469 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 LYPD8Q6UX82 237 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 ANGPTL8Q6UXH0 198 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.65□□□□□ -0.38
SOD1-204ENST00000476106 GALNT10Q86SR1 603 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 OR4N2Q8NGD1 307 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 OR8J2Q8NGG1 315 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 CPT1CQ8TCG5 803 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 VPS33AQ96AX1 596 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 EFHD2Q96C19 240 aaPredicted RBP12.65□□□□□ -0.38
SOD1-204ENST00000476106 RMND5BQ96G75 393 aaPredicted RBP12.65□□□□□ -0.38
SOD1-204ENST00000476106 BTBD9Q96Q07 612 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 INPP5KQ9BT40 448 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 TSPAN10Q9H1Z9 355 aaPredicted RBP12.65□□□□□ -0.38
SOD1-204ENST00000476106 SDR39U1Q9NRG7 319 aaPredicted RBP12.65□□□□□ -0.38
SOD1-204ENST00000476106 FAM120CQ9NX05 1096 aaKnown RBP12.65□□□□□ -0.38
SOD1-204ENST00000476106 ZIM2Q9NZV7 527 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 NTNG1Q9Y2I2 539 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 KLF13Q9Y2Y9 288 aaPredicted RBP12.65□□□□□ -0.38
SOD1-204ENST00000476106 NPFFR2Q9Y5X5 522 aa12.65□□□□□ -0.38
SOD1-204ENST00000476106 ESPL1Q14674 2120 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 GXYLT2A0PJZ3 443 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 RNASET2O00584 256 aaKnown RBP12.64□□□□□ -0.39
SOD1-204ENST00000476106 REM1O75628 298 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 RASAL1O95294 804 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 P04436 131 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 GSNP06396 782 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 FBXO45P0C2W1 286 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 CT45A8P0DMV1 189 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 CT45A9P0DMV2 189 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 ACP2P11117 423 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 GABRA3P34903 492 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 KRT20P35900 424 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 CHI3L1P36222 383 aaPredicted RBP12.64□□□□□ -0.39
SOD1-204ENST00000476106 PPICP45877 212 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 DNASE1L1P49184 302 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 TMED10P49755 219 aaKnown RBP12.64□□□□□ -0.39
SOD1-204ENST00000476106 ARFIP2P53365 341 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 SEC24CP53992 1094 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 GAB1Q13480 694 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 SQLEQ14534 574 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 INPP5JQ15735 1006 aaPredicted RBP12.64□□□□□ -0.39
SOD1-204ENST00000476106 AGKQ53H12 422 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 CT45A2Q5DJT8 189 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 C6orf10Q5SRN2 563 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 ANXA8L1Q5VT79 327 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 GK5Q6ZS86 529 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 GPALPP1Q8IXQ4 340 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 SLC34A3Q8N130 599 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 CPSF7Q8N684 471 aaKnown RBP12.64□□□□□ -0.39
SOD1-204ENST00000476106 SLC15A4Q8N697 577 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 NATD1Q8N6N6 113 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 FAM98AQ8NCA5 519 aaKnown RBP12.64□□□□□ -0.39
SOD1-204ENST00000476106 VPS37AQ8NEZ2 397 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 OR56A1Q8NGH5 318 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 GPR151Q8TDV0 419 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 GRHL3Q8TE85 626 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 PIK3R3Q92569 461 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 TP53INP1Q96A56 240 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 SNRNP40Q96DI7 357 aaKnown RBP12.64□□□□□ -0.39
SOD1-204ENST00000476106 SCMH1Q96GD3 660 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 C16orf58Q96GQ5 468 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 SLC35G5Q96KT7 338 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 JSRP1Q96MG2 331 aaPredicted RBP12.64□□□□□ -0.39
SOD1-204ENST00000476106 PANX1Q96RD7 426 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 SIKE1Q9BRV8 207 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 ASF1BQ9NVP2 202 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 CCDC167Q9P0B6 97 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 TRIM33Q9UPN9 1127 aa12.64□□□□□ -0.39
SOD1-204ENST00000476106 GPR55Q9Y2T6 319 aaPredicted RBP12.64□□□□□ -0.39
SOD1-204ENST00000476106 PRRC2CQ9Y520 2896 aaKnown RBP12.63□□□□□ -0.39
SOD1-204ENST00000476106 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.63□□□□□ -0.39
SOD1-204ENST00000476106 PRSS51A0A1B0GVH4 220 aa12.63□□□□□ -0.39
SOD1-204ENST00000476106 A1L4Q6 167 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms