RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 PCSK1P29120 753 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 HOXA6P31267 233 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 CHI3L1P36222 383 aaPredicted RBP9.98□□□□□ -0.81
ABCF1-205ENST00000475993 RFX3P48380 749 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 SELENOPP49908 381 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 TSPAN5P62079 268 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 SYT14P1Q58G82 188 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 OR2B11Q5JQS5 317 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 COX20Q5RI15 118 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 CRTC1Q6UUV9 634 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 NUDT18Q6ZVK8 323 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 ZER1Q7Z7L7 766 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 LRRC28Q86X40 367 aaPredicted RBP9.98□□□□□ -0.81
ABCF1-205ENST00000475993 OR5M3Q8NGP4 307 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 NEIL3Q8TAT5 605 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 PHOSPHO1Q8TCT1 267 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 CHFRQ96EP1 664 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 ARHGAP9Q9BRR9 750 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 DNTTIP1Q9H147 329 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 LATS2Q9NRM7 1088 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 CHD5Q8TDI0 1954 aa9.98□□□□□ -0.81
ABCF1-205ENST00000475993 LOC390937A0A1W2PQ73 354 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 FFAR1O14842 300 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 PRKYO43930 277 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 FBP1P09467 338 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 ETFAP13804 333 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 CALCRP30988 508 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 SLC6A4P31645 630 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 SRP9P49458 86 aaKnown RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 SNRPEP62304 92 aaKnown RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 SMAD4Q13485 552 aaKnown RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 SCARB2Q14108 478 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 PUM1Q14671 1186 aaKnown RBP eCLIP9.97□□□□□ -0.812e-11■□□□□ 11.3
ABCF1-205ENST00000475993 CRB2Q5IJ48 1285 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 RTL10Q7L3V2 364 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 TRMT11Q7Z4G4 463 aaKnown RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 ZNF485Q8NCK3 441 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 DBF4BQ8NFT6 615 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 AKR7LQ8NHP1 331 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 MOSPD2Q8NHP6 518 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 LKAAEAR1Q8TD35 194 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 OR4K3Q96R72 315 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 NKX6-2Q9C056 277 aaPredicted RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 SLC32A1Q9H598 525 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 METTL17Q9H7H0 456 aaPredicted RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 MRPS18AQ9NVS2 196 aaKnown RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 MYEF2Q9P2K5 600 aaKnown RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 EEF1E1O43324 174 aaKnown RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 RASGRP1O95267 797 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 H2AFB1P0C5Y9 115 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 H2AFB2P0C5Z0 115 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 CXCL2P19875 107 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 POU3F2P20265 443 aaPredicted RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 DGKAP23743 735 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 DDX6P26196 483 aaKnown RBP eCLIP9.97□□□□□ -0.815e-6■■□□□ 14.2
ABCF1-205ENST00000475993 GIFP27352 417 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 RBMS1P29558 406 aaKnown RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 CRATP43155 626 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 KIAA1024LP59773 190 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 ARHGEF7Q14155 803 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 PON3Q15166 354 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 XKR6Q5GH73 641 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 PTRHD1Q6GMV3 140 aaKnown RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 FBXL22Q6P050 247 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 PRICKLE2Q7Z3G6 844 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 CIR1Q86X95 450 aaPredicted RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 MARCH9Q86YJ5 346 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 ZNF687Q8N1G0 1237 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 BEST4Q8NFU0 473 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 NFKBIDQ8NI38 313 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 WDR20Q8TBZ3 569 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 FGF11Q92914 225 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 POM121Q96HA1 1249 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 PEX11GQ96HA9 241 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 FUBP3Q96I24 572 aaKnown RBP eCLIP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 LURAP1Q96LR2 239 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 HS6ST2Q96MM7 605 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 POLDIP3Q9BY77 421 aaKnown RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 C11orf49Q9H6J7 331 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 FGF20Q9NP95 211 aaPredicted RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 ZNF624Q9P2J8 865 aaPredicted RBP9.97□□□□□ -0.81
ABCF1-205ENST00000475993 CBLCQ9ULV8 474 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 PCDHGC4Q9Y5F7 938 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 PCDHGA5Q9Y5G8 931 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 PCDHGA1Q9Y5H4 931 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 PATJQ8NI35 1801 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 GREB1Q4ZG55 1949 aa9.97□□□□□ -0.81
ABCF1-205ENST00000475993 PLSCR5A0PG75 271 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 H3BN98 237 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 H3BRB1 525 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 GABRPO00591 440 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 SCAMP2O15127 329 aaKnown RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 TLX2O43763 284 aaPredicted RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 SSNA1O43805 119 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 RGRP47804 291 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 PITPNBP48739 271 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 AFF1P51825 1210 aaKnown RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 SPCS3P61009 180 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 MLLT1Q03111 559 aaPredicted RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 TMEM44Q2T9K0 475 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms