RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SLC35F6Q8N357 371 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 TRPC4APQ8TEL6 797 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 SLC35A4Q96G79 324 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 MARK4Q96L34 752 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 IPPKQ9H8X2 491 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 MAT2BQ9NZL9 334 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 EHD3Q9NZN3 535 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 PROCRQ9UNN8 238 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 PLLPQ9Y342 182 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 ZNF175Q9Y473 711 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 FBN1P35555 2871 aaKnown RBP11.37□□□□□ -0.59
SKA3-206ENST00000475251 TCRBV9S1A1TA0A576 114 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 CXorf49A8MYA2 514 aaPredicted RBP11.37□□□□□ -0.59
SKA3-206ENST00000475251 TNFRSF21O75509 655 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 REM1O75628 298 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 BCAS2O75934 225 aaPredicted RBP11.37□□□□□ -0.59
SKA3-206ENST00000475251 CLDN9O95484 217 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 KLK1P06870 262 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 GSTA2P09210 222 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 FCGR2AP12318 317 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 IL12BP29460 328 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 SSTR1P30872 391 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 ARL1P40616 181 aaPredicted RBP11.37□□□□□ -0.59
SKA3-206ENST00000475251 KIR2DL2P43627 348 aaPredicted RBP11.37□□□□□ -0.59
SKA3-206ENST00000475251 MAPK12P53778 367 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 DSCR4P56555 118 aaPredicted RBP11.37□□□□□ -0.59
SKA3-206ENST00000475251 SIRPAP78324 504 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 GTF2H2Q13888 395 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 EXOSC7Q15024 291 aaKnown RBP11.37□□□□□ -0.59
SKA3-206ENST00000475251 PFKFB4Q16877 469 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 FAM83EQ2M2I3 478 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 DESI1Q6ICB0 168 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 SLC48A1Q6P1K1 146 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 GTF2H2CQ6P1K8 395 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 ZNF704Q6ZNC4 412 aaPredicted RBP11.37□□□□□ -0.59
SKA3-206ENST00000475251 SH2D5Q6ZV89 423 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 CTAGE3PQ8IX95 158 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 UBQLNLQ8IYU4 475 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 L3MBTL4Q8NA19 623 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 OR4K17Q8NGC6 315 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 OR52R1Q8NGF1 315 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 IGFBPL1Q8WX77 278 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 TMEM158Q8WZ71 300 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 TRIM31Q9BZY9 425 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 ZNF639Q9UID6 485 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 FBXL2Q9UKC9 423 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 ACOT9Q9Y305 439 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 PCDHA9Q9Y5H5 950 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 COL6A5A8TX70 2615 aa11.37□□□□□ -0.59
SKA3-206ENST00000475251 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.36□□□□□ -0.59
SKA3-206ENST00000475251 FAM159BA6NKW6 160 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 CCDC188H7C350 402 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 EIF3HO15372 352 aaKnown RBP eCLIP11.36□□□□□ -0.59
SKA3-206ENST00000475251 TLX2O43763 284 aaPredicted RBP11.36□□□□□ -0.59
SKA3-206ENST00000475251 ERAL1O75616 437 aaKnown RBP11.36□□□□□ -0.59
SKA3-206ENST00000475251 CGAP01215 116 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 MTHFD2P13995 350 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 GRK2P25098 689 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 LOXP28300 417 aaPredicted RBP11.36□□□□□ -0.59
SKA3-206ENST00000475251 NEK2P51955 445 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 GPX6P59796 221 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 RPS3AP61247 264 aaKnown RBP11.36□□□□□ -0.59
SKA3-206ENST00000475251 OCRLQ01968 901 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 TNK1Q13470 666 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 VEZF1Q14119 521 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 GANABQ14697 944 aaKnown RBP11.36□□□□□ -0.59
SKA3-206ENST00000475251 TTC19Q6DKK2 380 aaPredicted RBP11.36□□□□□ -0.59
SKA3-206ENST00000475251 KLC3Q6P597 504 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 FAM111BQ6SJ93 734 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 GOLGA7Q7Z5G4 137 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 ZNF611Q8N823 705 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 GFM2Q969S9 779 aaKnown RBP11.36□□□□□ -0.59
SKA3-206ENST00000475251 TMBIM1Q969X1 311 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 ATP6V1E2Q96A05 226 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 KLHL29Q96CT2 875 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 KCTD12Q96CX2 325 aaKnown RBP11.36□□□□□ -0.59
SKA3-206ENST00000475251 ERP27Q96DN0 273 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 TRMT61AQ96FX7 289 aaKnown RBP11.36□□□□□ -0.59
SKA3-206ENST00000475251 ADOQ96SZ5 270 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 FAIM2Q9BWQ8 316 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 PINK1Q9BXM7 581 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 KLHL4Q9C0H6 718 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 STMN4Q9H169 189 aaPredicted RBP11.36□□□□□ -0.59
SKA3-206ENST00000475251 RNF122Q9H9V4 155 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 PPP4R1LQ9P1A2 415 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 GPR55Q9Y2T6 319 aaPredicted RBP11.36□□□□□ -0.59
SKA3-206ENST00000475251 RNF11Q9Y3C5 154 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 ZNF780BQ9Y6R6 833 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 TLN2Q9Y4G6 2542 aa11.36□□□□□ -0.59
SKA3-206ENST00000475251 A0A087X1B8 175 aa11.35□□□□□ -0.59
SKA3-206ENST00000475251 HS3ST1O14792 307 aa11.35□□□□□ -0.59
SKA3-206ENST00000475251 TP73O15350 636 aa11.35□□□□□ -0.59
SKA3-206ENST00000475251 ZIC3O60481 467 aa11.35□□□□□ -0.59
SKA3-206ENST00000475251 SOX30O94993 753 aa11.35□□□□□ -0.59
SKA3-206ENST00000475251 CBX7O95931 251 aa11.35□□□□□ -0.59
SKA3-206ENST00000475251 FEN1P39748 380 aaKnown RBP11.35□□□□□ -0.59
SKA3-206ENST00000475251 EMDP50402 254 aa11.35□□□□□ -0.59
SKA3-206ENST00000475251 PNLIPRP2P54317 469 aa11.35□□□□□ -0.59
SKA3-206ENST00000475251 RPS4XP62701 263 aaKnown RBP11.35□□□□□ -0.59
SKA3-206ENST00000475251 MGAT2Q10469 447 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms