RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 OR5M9Q8NGP3 310 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 TWIST2Q8WVJ9 160 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 ASB5Q8WWX0 329 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 RND1Q92730 232 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 TMBIM1Q969X1 311 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 JSRP1Q96MG2 331 aaPredicted RBP12.86□□□□□ -0.35
COMMD3-208ENST00000470045 AMDHD1Q96NU7 426 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 BBS4Q96RK4 519 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 OSBPL11Q9BXB4 747 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 GLIPR2Q9H4G4 154 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 METTL7AQ9H8H3 244 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 FOLH1BQ9HBA9 442 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 TAS2R9Q9NYW1 312 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 RNF6Q9Y252 685 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 TMED5Q9Y3A6 229 aa12.86□□□□□ -0.35
COMMD3-208ENST00000470045 ABCA12Q86UK0 2595 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 PRAMEF25A6NGN4 478 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 ESPNB1AK53 854 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 TMEM233B4DJY2 109 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 COQ9O75208 318 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 NME6O75414 186 aaPredicted RBP12.85□□□□□ -0.35
COMMD3-208ENST00000470045 BPGMP07738 259 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 HOXD4P09016 255 aaPredicted RBP12.85□□□□□ -0.35
COMMD3-208ENST00000470045 LINC00032P0C843 101 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 CHRNB4P30926 498 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 NTSP30990 170 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 MC3RP41968 323 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 KIR3DL1P43629 444 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 MASP1P48740 699 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 NCBP2P52298 156 aaKnown RBP eCLIP12.85□□□□□ -0.35
COMMD3-208ENST00000470045 PSG6Q00889 435 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 CRYZQ08257 329 aaKnown RBP12.85□□□□□ -0.35
COMMD3-208ENST00000470045 PDE7AQ13946 482 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 RFTN2Q52LD8 501 aaPredicted RBP12.85□□□□□ -0.35
COMMD3-208ENST00000470045 XKR7Q5GH72 579 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 B3GNT6Q6ZMB0 384 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 ZCCHC23Q6ZST2 131 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 CLYBLQ8N0X4 340 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 CA5BP1Q8WTZ4 195 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 COL21A1Q96P44 957 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 GNRHR2Q96P88 292 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 TREX2Q9BQ50 279 aaPredicted RBP12.85□□□□□ -0.35
COMMD3-208ENST00000470045 TTYH2Q9BSA4 534 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 EXO5Q9H790 373 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 EML4Q9HC35 981 aaKnown RBP12.85□□□□□ -0.35
COMMD3-208ENST00000470045 ACAD8Q9UKU7 415 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 C19orf53Q9UNZ5 99 aaPredicted RBP12.85□□□□□ -0.35
COMMD3-208ENST00000470045 FIS1Q9Y3D6 152 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 TRAF6Q9Y4K3 522 aa12.85□□□□□ -0.35
COMMD3-208ENST00000470045 DCHS2Q6V1P9 2916 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 UPK1AO00322 258 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 PIP5K1BO14986 540 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 ICOSLGO75144 302 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 GLI4P10075 376 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 GABRA1P14867 456 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 FRKP42685 505 aaPredicted RBP12.84□□□□□ -0.35
COMMD3-208ENST00000470045 TRPC1P48995 793 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 PNLIPRP2P54317 469 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 RPL38P63173 70 aaKnown RBP12.84□□□□□ -0.35
COMMD3-208ENST00000470045 TFF3Q07654 80 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 PMPCAQ10713 525 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 KRT71Q3SY84 523 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 ZNF385BQ569K4 471 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 TNFAIP8L3Q5GJ75 292 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 NHSL2Q5HYW2 709 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 C1orf185Q5T7R7 199 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 ZNF585AQ6P3V2 769 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 TMEM107Q6UX40 140 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 ANGPTL8Q6UXH0 198 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 ULK2Q8IYT8 1036 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 LIX1Q8N485 282 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 LILRB4Q8NHJ6 448 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 ELP4Q96EB1 424 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 TRIM8Q9BZR9 551 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 ENKD1Q9H0I2 346 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 GALNT9Q9HCQ5 603 aa12.84□□□□□ -0.35
COMMD3-208ENST00000470045 SSU72Q9NP77 194 aaKnown RBP12.84□□□□□ -0.35
COMMD3-208ENST00000470045 GNB5O14775 395 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 REM1O75628 298 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 COX6B1P14854 86 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 IGFBP2P18065 325 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 ZNF155Q12901 538 aaPredicted RBP12.83□□□□□ -0.36
COMMD3-208ENST00000470045 EFR3AQ14156 821 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 SH2D4BQ5SQS7 431 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 VASNQ6EMK4 673 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 CCDC71Q8IV32 467 aaPredicted RBP12.83□□□□□ -0.36
COMMD3-208ENST00000470045 SLC44A2Q8IWA5 706 aaPredicted RBP12.83□□□□□ -0.36
COMMD3-208ENST00000470045 MCEMP1Q8IX19 187 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 DDIASQ8IXT1 998 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 WDSUB1Q8N9V3 476 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 OR1J4Q8NGS1 313 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 HOXB13Q92826 284 aaPredicted RBP12.83□□□□□ -0.36
COMMD3-208ENST00000470045 TMCO6Q96DC7 493 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 MTERF3Q96E29 417 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 TSSK3Q96PN8 268 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 SPOCK3Q9BQ16 436 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 PRDM14Q9GZV8 571 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 REEP4Q9H6H4 257 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 RUBCNLQ9H714 662 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 DDX18Q9NVP1 670 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms