RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 RECKO95980 971 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 CFIP05156 583 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 CLEC2LP0C7M8 214 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 PSKH1P11801 424 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ARSBP15848 533 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 NAT1P18440 290 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 CFL1P23528 166 aaKnown RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 POU1F1P28069 291 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 TIA1P31483 386 aaKnown RBP eCLIP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 HBA1P69905 142 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ABATP80404 500 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 BCL2L1Q07817 233 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 MRPL28Q13084 256 aaKnown RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 DOC2AQ14183 400 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 WSCD2Q2TBF2 565 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 XKR6Q5GH73 641 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 C3orf38Q5JPI3 329 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ATXN7L2Q5T6C5 722 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 BICRALQ6AI39 1079 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 C22orf42Q6IC83 251 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 KIAA1211LQ6NV74 962 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 CD200R1LQ6Q8B3 271 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 UNC5DQ6UXZ4 953 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 QSOX2Q6ZRP7 698 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 FAM217AQ8IXS0 508 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 Q8N402 240 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 CPXM2Q8N436 756 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 C9orf62Q8N4C0 152 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 NATD1Q8N6N6 113 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ZNF557Q8N988 423 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 CDC26Q8NHZ8 85 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 APOBEC4Q8WW27 367 aaKnown RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 AKAP1Q92667 903 aaKnown RBP eCLIP9.04□□□□□ -0.962e-6■■□□□ 12.5
HDAC3-205ENST00000469550 MRGPRX1Q96LB2 322 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 GPR137Q96N19 417 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 SCNM1Q9BWG6 230 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 HDHD5Q9BXW7 423 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 POLDIP3Q9BY77 421 aaKnown RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 FOLH1BQ9HBA9 442 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 DNAJC27Q9NZQ0 273 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ELF5Q9UKW6 265 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ZMIZ1Q9ULJ6 1067 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 EXO1Q9UQ84 846 aaKnown RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 MSRB2Q9Y3D2 182 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 HSPB11Q9Y547 144 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 OR51B4Q9Y5P0 310 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 CEP295Q9C0D2 2601 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 CACNA1EQ15878 2313 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 NUP214P35658 2090 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-205ENST00000469550 WASHC1A8K0Z3 465 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 FFAR1O14842 300 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 RFPL3O75679 317 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 IGLV3-19P01714 112 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 SYPP08247 313 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 CD59P13987 128 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 HK1P19367 917 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 APEX1P27695 318 aaKnown RBP9.03□□□□□ -0.96
HDAC3-205ENST00000469550 CORO1AP31146 461 aaKnown RBP9.03□□□□□ -0.96
HDAC3-205ENST00000469550 UQCRC1P31930 480 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 EVX1P49640 407 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 XKP51811 444 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 PNLIPRP1P54315 467 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 WNT4P56705 351 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 B4GALNT1Q00973 533 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 TAGLNQ01995 201 aaKnown RBP9.03□□□□□ -0.96
HDAC3-205ENST00000469550 PDE7AQ13946 482 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 GANABQ14697 944 aaKnown RBP9.03□□□□□ -0.96
HDAC3-205ENST00000469550 KLHL22Q53GT1 634 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 TRILQ7L0X0 811 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 HDDC2Q7Z4H3 204 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 HDDC3Q8N4P3 179 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 GPR26Q8NDV2 337 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 OR52I1Q8NGK6 324 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 DNASE2BQ8WZ79 361 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 FOXJ1Q92949 421 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 UPRTQ96BW1 309 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 HSPA12BQ96MM6 686 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 TEFMQ96QE5 360 aaKnown RBP9.03□□□□□ -0.96
HDAC3-205ENST00000469550 MTERF1Q99551 399 aaKnown RBP9.03□□□□□ -0.96
HDAC3-205ENST00000469550 PRRG3Q9BZD7 231 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 ZDHHC5Q9C0B5 715 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 FGF20Q9NP95 211 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-205ENST00000469550 USP36Q9P275 1121 aaKnown RBP9.03□□□□□ -0.96
HDAC3-205ENST00000469550 THAP10Q9P2Z0 257 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-205ENST00000469550 GULP1Q9UBP9 304 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 CYP8B1Q9UNU6 501 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 FCF1Q9Y324 198 aaKnown RBP9.03□□□□□ -0.96
HDAC3-205ENST00000469550 CDH10Q9Y6N8 788 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 CHD6Q8TD26 2715 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 TRDV1A0A1B0GX56 115 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 SLC22A5O76082 557 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 ETHE1O95571 254 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 PDGFAP04085 211 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 NR2F6P10588 404 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 GABRA5P31644 462 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 WASP42768 502 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 MAPK12P53778 367 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 SMIM11AP58511 58 aa9.03□□□□□ -0.96
HDAC3-205ENST00000469550 COX10Q12887 443 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms