RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 IGFL1Q6UW32 110 aa1.67□□□□□ -2.14
SSB-208ENST00000468600 CXCL17Q6UXB2 119 aa1.67□□□□□ -2.14
SSB-208ENST00000468600 LRRC31Q6UY01 552 aa1.67□□□□□ -2.14
SSB-208ENST00000468600 MSANTD1Q6ZTZ1 278 aa1.67□□□□□ -2.14
SSB-208ENST00000468600 PIWIL3Q7Z3Z3 882 aaKnown RBP1.67□□□□□ -2.14
SSB-208ENST00000468600 TMEM110Q86TL2 294 aa1.67□□□□□ -2.14
SSB-208ENST00000468600 KLHL7Q8IXQ5 586 aa1.67□□□□□ -2.14
SSB-208ENST00000468600 NUP93Q8N1F7 819 aa1.67□□□□□ -2.14
SSB-208ENST00000468600 ANKRD49Q8WVL7 239 aa1.67□□□□□ -2.14
SSB-208ENST00000468600 GLYATL1Q969I3 302 aa1.67□□□□□ -2.14
SSB-208ENST00000468600 C11orf24Q96F05 449 aaPredicted RBP1.67□□□□□ -2.14
SSB-208ENST00000468600 TMEM101Q96IK0 257 aa1.67□□□□□ -2.14
SSB-208ENST00000468600 NTMT1Q9BV86 223 aa1.67□□□□□ -2.14
SSB-208ENST00000468600 NXF3Q9H4D5 531 aaKnown RBP1.67□□□□□ -2.14
SSB-208ENST00000468600 DDX28Q9NUL7 540 aaKnown RBP1.67□□□□□ -2.14
SSB-208ENST00000468600 CDH7Q9ULB5 785 aa1.67□□□□□ -2.14
SSB-208ENST00000468600 FBN1P35555 2871 aaKnown RBP1.67□□□□□ -2.14
SSB-208ENST00000468600 IMPA2O14732 288 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 ECDO95905 644 aaPredicted RBP1.66□□□□□ -2.14
SSB-208ENST00000468600 IGKV1-17P01599 117 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 STSP08842 583 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 NUDT17P0C025 328 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 B4GALT1P15291 398 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 FCARP24071 287 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 PRR5LQ6MZQ0 368 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 CDC42EP5Q6NZY7 148 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 SIDT2Q8NBJ9 832 aaKnown RBP1.66□□□□□ -2.14
SSB-208ENST00000468600 NEIL3Q8TAT5 605 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 C7orf33Q8WU49 177 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 LHX4Q969G2 390 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 NEIL2Q969S2 332 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 TADA1Q96BN2 335 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 DNAJA3Q96EY1 480 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 CXorf58Q96LI9 332 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 GBP5Q96PP8 586 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 MLPHQ9BV36 600 aaPredicted RBP1.66□□□□□ -2.14
SSB-208ENST00000468600 NAPBQ9H115 298 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 MMP26Q9NRE1 261 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 PHF11Q9UIL8 331 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 ZNF223Q9UK11 482 aaPredicted RBP1.66□□□□□ -2.14
SSB-208ENST00000468600 NAP1L2Q9ULW6 460 aaPredicted RBP1.66□□□□□ -2.14
SSB-208ENST00000468600 BARX2Q9UMQ3 279 aaPredicted RBP1.66□□□□□ -2.14
SSB-208ENST00000468600 SMC3Q9UQE7 1217 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 PLEKHG1Q9ULL1 1385 aa1.66□□□□□ -2.14
SSB-208ENST00000468600 LRRD1A4D1F6 860 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 TBL1XO60907 577 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 NME6O75414 186 aaPredicted RBP1.65□□□□□ -2.15
SSB-208ENST00000468600 ZNF254O75437 659 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 GAS8O95995 478 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 IFNAR1P17181 557 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 TBPP20226 339 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 MAGP20916 626 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 NF2P35240 595 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 KRT20P35900 424 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 NUDT1P36639 197 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 CTRLP40313 264 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 STXBP2Q15833 593 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 ZNF789Q5FWF6 425 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 CAVIN1Q6NZI2 390 aaKnown RBP1.65□□□□□ -2.15
SSB-208ENST00000468600 ADAMTSL2Q86TH1 951 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 LINC01551Q86U37 167 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 TMEM126BQ8IUX1 230 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 THNSL1Q8IYQ7 743 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 CHCHD4Q8N4Q1 142 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 ZBTB44Q8NCP5 570 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 OR7G3Q8NG95 312 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 TAF4BQ92750 862 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 FGGYQ96C11 551 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 MRPL53Q96EL3 112 aaKnown RBP1.65□□□□□ -2.15
SSB-208ENST00000468600 PLA2G12AQ9BZM1 189 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 VPS54Q9P1Q0 977 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 NFKBIL1Q9UBC1 381 aaPredicted RBP1.65□□□□□ -2.15
SSB-208ENST00000468600 LHX3Q9UBR4 397 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 CFDP1Q9UEE9 299 aaPredicted RBP1.65□□□□□ -2.15
SSB-208ENST00000468600 LCMT1Q9UIC8 334 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 USP6P35125 1406 aa1.65□□□□□ -2.15
SSB-208ENST00000468600 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.64□□□□□ -2.15
SSB-208ENST00000468600 FAM166BA8MTA8 275 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 TRAF3IP2O43734 574 aaPredicted RBP1.64□□□□□ -2.15
SSB-208ENST00000468600 DKC1O60832 514 aaKnown RBP eCLIP1.64□□□□□ -2.15
SSB-208ENST00000468600 SUPT7LO94864 414 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 REC8O95072 547 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 CHRNGP07510 517 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 CPA3P15088 417 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 GK2Q14410 553 aaPredicted RBP1.64□□□□□ -2.15
SSB-208ENST00000468600 PTGES3Q15185 160 aaKnown RBP1.64□□□□□ -2.15
SSB-208ENST00000468600 LY6EQ16553 131 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 EPC2Q52LR7 807 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 TOR1AIP1Q5JTV8 583 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 OR5M10Q6IEU7 315 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 ZFP2Q6ZN57 461 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 GLRX5Q86SX6 157 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 KRTAP13-1Q8IUC0 172 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 ZNF100Q8IYN0 542 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 CSNK1A1LQ8N752 337 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 SUMF2Q8NBJ7 301 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 MDS2Q8NDY4 140 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 OR52J3Q8NH60 311 aa1.64□□□□□ -2.15
SSB-208ENST00000468600 DLX4Q92988 240 aaPredicted RBP1.64□□□□□ -2.15
SSB-208ENST00000468600 VPS39Q96JC1 886 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms