RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PIP4P1Q86T03 277 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 GPR180Q86V85 440 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ANKRD46Q86W74 232 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 NUDT13Q86X67 352 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 SNX32Q86XE0 403 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 KMT5CQ86Y97 462 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TICAM1Q8IUC6 712 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TMEM126BQ8IUX1 230 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 OR4N5Q8IXE1 308 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 PRSS58Q8IYP2 241 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 DSELQ8IZU8 1212 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CPSF7Q8N684 471 aaKnown RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ACOT4Q8N9L9 421 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 FAM47BQ8NA70 645 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 OR7A2PQ8NGA2 310 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 DOK4Q8TEW6 326 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 VPS33AQ96AX1 596 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 EXOSC8Q96B26 276 aaKnown RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF501Q96CX3 271 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 SMIM10Q96HG1 83 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 MAGED4Q96JG8 741 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC41A2Q96JW4 573 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TEX37Q96LM6 180 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TEFMQ96QE5 360 aaKnown RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 SERINC2Q96SA4 455 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 PRPF18Q99633 342 aaKnown RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 MAPKAP1Q9BPZ7 522 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 VKORC1Q9BQB6 163 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TUBB6Q9BUF5 446 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 SARGQ9BW04 601 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 FAIM2Q9BWQ8 316 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ROGDIQ9GZN7 287 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TWSG1Q9GZX9 223 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ACTR5Q9H9F9 607 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 APMAPQ9HDC9 416 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 LHX9Q9NQ69 397 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CUTCQ9NTM9 273 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TXLNGQ9NUQ3 528 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 C5AR2Q9P296 337 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 DHCR7Q9UBM7 475 aaKnown RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 PISDQ9UG56 409 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TAGLN3Q9UI15 199 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 NDUFAF1Q9Y375 327 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TMED5Q9Y3A6 229 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 LOXL2Q9Y4K0 774 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ATG4BQ9Y4P1 393 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 KLK4Q9Y5K2 254 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 SPACA6W5XKT8 324 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 MN1Q10571 1320 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CACNA1EQ15878 2313 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF318Q5VUA4 2279 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 UNC13CQ8NB66 2214 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 A0A0A6YYD5 115 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 FAM234BA2RU67 622 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 OR2W5A6NFC9 320 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 A8MUA0 341 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ANKRD65E5RJM6 399 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 TMX2-CTNND1H3BSU7 103 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ANGPT2O15123 496 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 NVLO15381 856 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PROM1O43490 865 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 GALR3O60755 368 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 GUCY1B2O75343 617 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ERN1O75460 977 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SCRG1O75711 98 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CDC123O75794 336 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SEMA3DO95025 777 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ANP32DO95626 131 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ABCB1P08183 1280 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ANKRD34CP0C6C1 535 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 T-ENOLP0DO92 83 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 LAMP1P11279 417 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PIM1P11309 404 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 TNNI3P19429 210 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PRPS1L1P21108 318 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 FBLP22087 321 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PEX2P28328 305 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC7A1P30825 629 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 TLX1P31314 330 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PTGER1P34995 402 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 HPCAL1P37235 193 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 FEN1P39748 380 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ETV5P41161 510 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ASMTP46597 345 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CLNS1AP54105 237 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ARSFP54793 590 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 LIM2P55344 173 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 TRA2BP62995 288 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CXADRP78310 365 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SHC2P98077 582 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 DGCR2P98153 550 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 MC2RQ01718 297 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 RELAQ04206 551 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ZFP36L1Q07352 338 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ACTN3Q08043 901 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF763Q0D2J5 394 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 STX5Q13190 355 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ILKQ13418 452 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 KRT72Q14CN4 511 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms