RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 SFTPA1Q8IWL2 248 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 OR4A15Q8NGL6 344 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 ASB12Q8WXK4 309 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 CLP1Q92989 425 aaKnown RBP17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 PAWRQ96IZ0 340 aaKnown RBP17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 DUSP26Q9BV47 211 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 COPZ2Q9P299 210 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 FZD4Q9ULV1 537 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 PIPSLA2A3N6 862 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 GTPBP1O00178 669 aaKnown RBP17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 PLATP00750 562 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 TGFB1P01137 390 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 CRYBA2P53672 197 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 MTAPQ13126 283 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 NCF4Q15080 339 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 PLA1AQ53H76 456 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 RGS7BPQ6MZT1 257 aaPredicted RBP17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 NAGSQ8N159 534 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 GLYATL1Q969I3 302 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 INTS12Q96CB8 462 aaKnown RBP17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 NELL2Q99435 816 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 KATNB1Q9BVA0 655 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 BRD7Q9NPI1 651 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 COA4Q9NYJ1 87 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 EMC3Q9P0I2 261 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 CXXC1Q9P0U4 656 aaPredicted RBP17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 IL36AQ9UHA7 158 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 CLEC2DQ9UHP7 191 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 CYB5R1Q9UHQ9 305 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 SCP2D1Q9UJQ7 156 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 ADAM15Q13444 863 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 GPR176Q14439 515 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 LIPJQ5W064 366 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 LILRB2Q8N423 598 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 PLA2G15Q8NCC3 412 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 PROKR2Q8NFJ6 384 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 HHIPQ96QV1 700 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 MAPKAP1Q9BPZ7 522 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 HDHD2Q9H0R4 259 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 SPATA6Q9NWH7 488 aaPredicted RBP17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 PADI2Q9Y2J8 665 aa17.03■□□□□ 0.32
SNAPC3-205ENST00000467062 A8MVJ9 347 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 NPC1O15118 1278 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 PCDH7O60245 1069 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 HPGDSO60760 199 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 EPCAMP16422 314 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 PRPH2P23942 346 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 NNMTP40261 264 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 MEOX2P50222 304 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 SP140Q13342 867 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 CPTPQ5TA50 214 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 ZDHHC20Q5W0Z9 365 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 PARS2Q7L3T8 475 aaKnown RBP17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 GPR155Q7Z3F1 870 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 NANOGP1Q8N7R0 232 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 ZNF740Q8NDX6 193 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 NIPSNAP1Q9BPW8 284 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 OR2AG1Q9H205 316 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 ACSL6Q9UKU0 697 aa17.02■□□□□ 0.32
SNAPC3-205ENST00000467062 WASH3PC4AMC7 463 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 DNASE2O00115 360 aaPredicted RBP17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 SUV39H1O43463 412 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 IRS1P35568 1242 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 OR1E2P47887 323 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 SRSF11Q05519 484 aaKnown RBP17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 LRRC32Q14392 662 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 PTGES3Q15185 160 aaKnown RBP17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 ZNF385BQ569K4 471 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 C3orf38Q5JPI3 329 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 COX20Q5RI15 118 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 CORO6Q6QEF8 472 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 C17orf107Q6ZR85 190 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 CACUL1Q86Y37 369 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 TRAPPC5Q8IUR0 188 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 SAMD14Q8IZD0 417 aaPredicted RBP17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 TRAM1L1Q8N609 369 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 VN1R2Q8NFZ6 395 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 OR52J3Q8NH60 311 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 TMEM184CQ9NVA4 438 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 RLIMQ9NVW2 624 aa17.02■□□□□ 0.31
SNAPC3-205ENST00000467062 MGAT4DA6NG13 374 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 SLC16A5O15375 505 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 SIGLEC6O43699 453 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 GPX2P18283 190 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 CXCL3P19876 107 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 KCNJ10P78508 379 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 TECPR1Q7Z6L1 1165 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 MMP21Q8N119 569 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 LGI4Q8N135 537 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 OR5AK3PQ8NH89 298 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 ZNF480Q8WV37 535 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 SLC38A2Q96QD8 506 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 TTYH1Q9H313 450 aaPredicted RBP17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 SLC25A19Q9HC21 320 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 ACTR10Q9NZ32 417 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 HCN2Q9UL51 889 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 PLAGL1Q9UM63 463 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 PPIEQ9UNP9 301 aaKnown RBP17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 EXO1Q9UQ84 846 aaKnown RBP17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 GSTK1Q9Y2Q3 226 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms