RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 SH3GL1Q99961 368 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 HOPXQ9BPY8 73 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-205ENST00000466897 ADNPQ9H2P0 1102 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 SERHL2Q9H4I8 314 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 CDCP1Q9H5V8 836 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 TRIM45Q9H8W5 580 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-205ENST00000466897 A6NL46 340 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 EVPLLA8MZ36 301 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 WWP2O00308 870 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 OR2J2O76002 312 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 UNC5CO95185 931 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 AK1P00568 194 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 GUSBP08236 651 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 PIGAP37287 484 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 TMED10P49755 219 aaKnown RBP14.03□□□□□ -0.16
NPHP4-205ENST00000466897 NUDT2P50583 147 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 NR0B1P51843 470 aaKnown RBP14.03□□□□□ -0.16
NPHP4-205ENST00000466897 POLE2P56282 527 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 CORO7P57737 925 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 ART3Q13508 389 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 RGNQ15493 299 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 DUSP5Q16690 384 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 AP1ARQ63HQ0 302 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 B3GNTL1Q67FW5 361 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-205ENST00000466897 OPN5Q6U736 354 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 C6orf89Q6UWU4 347 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 IGFL3Q6UXB1 125 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 RNF130Q86XS8 419 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 ADAMTS15Q8TE58 950 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 THAP3Q8WTV1 239 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-205ENST00000466897 TTC9Q92623 222 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 AURKBQ96GD4 344 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-205ENST00000466897 C16orf58Q96GQ5 468 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 NSL1Q96IY1 281 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 OR7D2Q96RA2 312 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 GPATCH1Q9BRR8 931 aaKnown RBP14.03□□□□□ -0.16
NPHP4-205ENST00000466897 NDE1Q9NXR1 346 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-205ENST00000466897 AP3M1Q9Y2T2 418 aa14.03□□□□□ -0.16
NPHP4-205ENST00000466897 CACNA1BQ00975 2339 aa14.02□□□□□ -0.16
NPHP4-205ENST00000466897 AIM2O14862 343 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 ABCB7O75027 752 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 NME6O75414 186 aaPredicted RBP14.02□□□□□ -0.17
NPHP4-205ENST00000466897 CBX6O95503 412 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 FBXO45P0C2W1 286 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 ESRRAP11474 423 aaPredicted RBP14.02□□□□□ -0.17
NPHP4-205ENST00000466897 ABCD3P28288 659 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 LCN1P31025 176 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 GABRA3P34903 492 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 SSR4P51571 173 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 FCRLBQ6BAA4 426 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 HEPHL1Q6MZM0 1159 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 NANOGP8Q6NSW7 305 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 LYPD8Q6UX82 237 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 ANGPTL8Q6UXH0 198 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 SLC44A2Q8IWA5 706 aaPredicted RBP14.02□□□□□ -0.17
NPHP4-205ENST00000466897 SLC34A3Q8N130 599 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 BEST3Q8N1M1 668 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 CHDHQ8NE62 594 aaPredicted RBP14.02□□□□□ -0.17
NPHP4-205ENST00000466897 FAM110BQ8TC76 370 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 GPR151Q8TDV0 419 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 TM9SF4Q92544 642 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 SLC9A6Q92581 669 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 JADE3Q92613 823 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 HAS2Q92819 552 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 EXTL1Q92935 676 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 SLC35A4Q96G79 324 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 CRELD1Q96HD1 420 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 SPATA9Q9BWV2 254 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 BTBD2Q9BX70 525 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 OR51I1Q9H343 314 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 NANOGQ9H9S0 305 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 EXD2Q9NVH0 621 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 STMN3Q9NZ72 180 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 MRTO4Q9UKD2 239 aaKnown RBP14.02□□□□□ -0.17
NPHP4-205ENST00000466897 CBLCQ9ULV8 474 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 OR10H1Q9Y4A9 318 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 ZNF451Q9Y4E5 1061 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 NPFFR2Q9Y5X5 522 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 PKD1L2Q7Z442 2459 aa14.02□□□□□ -0.17
NPHP4-205ENST00000466897 OR6C70A6NIJ9 312 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 HMGN4O00479 90 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 MAN1A2O60476 641 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 ZNF354AO60765 605 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 C1QCP02747 245 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 T-ENOLP0DO92 83 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 SLC6A2P23975 617 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 HLCSP50747 726 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 PSMD4P55036 377 aaKnown RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 RPS26P62854 115 aaKnown RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 MRPS22P82650 360 aaKnown RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 CAPRIN1Q14444 709 aaKnown RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 NTRK2Q16620 822 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 COL28A1Q2UY09 1125 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 ZNF791Q3KP31 576 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 LINC00303Q3SY05 128 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 COX20Q5RI15 118 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 ATAD3BQ5T9A4 648 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms