RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 HEPHL1Q6MZM0 1159 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 TCTN3Q6NUS6 607 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 JMJD6Q6NYC1 403 aaPredicted RBP10.31□□□□□ -0.76
VCP-204ENST00000466100 TNFAIP8L2Q6P589 184 aaPredicted RBP10.31□□□□□ -0.76
VCP-204ENST00000466100 C16orf89Q6UX73 402 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 CCDC81Q6ZN84 652 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 C16orf47Q6ZP98 133 aaPredicted RBP10.31□□□□□ -0.76
VCP-204ENST00000466100 CCDC121Q6ZUS5 278 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 YTHDF3Q7Z739 585 aaKnown RBP10.31□□□□□ -0.76
VCP-204ENST00000466100 PTOV1Q86YD1 416 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 APLFQ8IW19 511 aaPredicted RBP10.31□□□□□ -0.76
VCP-204ENST00000466100 DEFB107AQ8IZN7 70 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 BRIX1Q8TDN6 353 aaKnown RBP10.31□□□□□ -0.76
VCP-204ENST00000466100 TP53INP1Q96A56 240 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 SLC35A4Q96G79 324 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 LCORQ96JN0 433 aaPredicted RBP10.31□□□□□ -0.76
VCP-204ENST00000466100 ZNF583Q96ND8 569 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 GAL3ST4Q96RP7 486 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 LMF1Q96S06 567 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 LRMDAQ9H2I8 198 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 PIGUQ9H490 435 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 CPNE5Q9HCH3 593 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 SPAG4Q9NPE6 437 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 ATP13A2Q9NQ11 1180 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 GMPR2Q9P2T1 348 aaKnown RBP10.31□□□□□ -0.76
VCP-204ENST00000466100 FAF1Q9UNN5 650 aaPredicted RBP10.31□□□□□ -0.76
VCP-204ENST00000466100 CORO2BQ9UQ03 480 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 KCNMB2Q9Y691 235 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 KALRNO60229 2985 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 NINQ8N4C6 2090 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 GXYLT2A0PJZ3 443 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 EVPLLA8MZ36 301 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 ACOX3O15254 700 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 MAN1A2O60476 641 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 DNAJB5O75953 348 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 ALOX5P09917 674 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 NUDT7P0C024 238 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 OR12D1P0DN82 309 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 TRHRP34981 398 aaPredicted RBP10.3□□□□□ -0.76
VCP-204ENST00000466100 UCNP55089 124 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 DSTNP60981 165 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 AP2B1P63010 937 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 MXRA7P84157 204 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 NNATQ16517 81 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 ZSCAN26Q16670 478 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 DEFB109BQ30KR1 87 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 BROXQ5VW32 411 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 LYPD8Q6UX82 237 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 ANGPTL8Q6UXH0 198 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 LRRC69Q6ZNQ3 347 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 ASRGL1Q7L266 308 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 SERPINA11Q86U17 422 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 SLC44A2Q8IWA5 706 aaPredicted RBP10.3□□□□□ -0.76
VCP-204ENST00000466100 ZZZ3Q8IYH5 903 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 CLEC1AQ8NC01 280 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 CHDHQ8NE62 594 aaPredicted RBP10.3□□□□□ -0.76
VCP-204ENST00000466100 OR4N2Q8NGD1 307 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 FAM110BQ8TC76 370 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 PIK3R3Q92569 461 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 SLC9A6Q92581 669 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 CDS1Q92903 461 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 RAB8BQ92930 207 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 THOC3Q96J01 351 aaKnown RBP10.3□□□□□ -0.76
VCP-204ENST00000466100 SH3GL1Q99961 368 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 BTBD10Q9BSF8 475 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 THUMPD3Q9BV44 507 aaKnown RBP10.3□□□□□ -0.76
VCP-204ENST00000466100 DEFB126Q9BYW3 111 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 LHPPQ9H008 270 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 ING2Q9H160 280 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 TMEM38AQ9H6F2 299 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 LIN28AQ9H9Z2 209 aaKnown RBP10.3□□□□□ -0.76
VCP-204ENST00000466100 A4GALTQ9NPC4 353 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 MYOTQ9UBF9 498 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 CD300AQ9UGN4 299 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 USP22Q9UPT9 525 aa10.3□□□□□ -0.76
VCP-204ENST00000466100 IGSF10Q6WRI0 2623 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 PRORSD1PA6NEY8 169 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 A8MVJ9 347 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 FAM220BPB1ANY3 271 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 WWP2O00308 870 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 CEACAM4O75871 244 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 ZIC2O95409 532 aaPredicted RBP10.29□□□□□ -0.76
VCP-204ENST00000466100 AGR2O95994 175 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 IGKV1D-16P01601 117 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 ARAFP10398 606 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 HSD17B1P14061 328 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 GABRA3P34903 492 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 PIGAP37287 484 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 CRATP43155 626 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 GSK3BP49841 420 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 NR0B1P51843 470 aaKnown RBP10.29□□□□□ -0.76
VCP-204ENST00000466100 TMPRSS3P57727 454 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 EEFSECP57772 596 aaKnown RBP10.29□□□□□ -0.76
VCP-204ENST00000466100 MLF1P58340 268 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 MRPS22P82650 360 aaKnown RBP10.29□□□□□ -0.76
VCP-204ENST00000466100 CEACAM7Q14002 265 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 ZNHIT3Q15649 155 aaPredicted RBP10.29□□□□□ -0.76
VCP-204ENST00000466100 FXNQ16595 210 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 CYP27C1Q4G0S4 372 aa10.29□□□□□ -0.76
VCP-204ENST00000466100 DNAL1Q4LDG9 190 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms