RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 BNIPLQ7Z465 357 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 TSEN54Q7Z6J9 526 aaKnown RBP4.26□□□□□ -1.73
PTCD3-205ENST00000464541 ANKRD20A12PQ8NF67 263 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 DDX47Q9H0S4 455 aaKnown RBP4.26□□□□□ -1.73
PTCD3-205ENST00000464541 OPN3Q9H1Y3 402 aaPredicted RBP4.26□□□□□ -1.73
PTCD3-205ENST00000464541 ANAPC11Q9NYG5 84 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 RPH3AQ9Y2J0 694 aaPredicted RBP4.26□□□□□ -1.73
PTCD3-205ENST00000464541 CLSPNQ9HAW4 1339 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 SYNRGQ9UMZ2 1314 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 A0A0J9YVX5 310 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 TRBV7-9A0A0J9YWB2 115 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 LRIT2A6NDA9 550 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 G3V3Y1 287 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 OR1D4P47884 311 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 NDPQ00604 133 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 GFPT1Q06210 699 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-205ENST00000464541 ZNF528Q3MIS6 628 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 ACSF3Q4G176 576 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-205ENST00000464541 CMPK2Q5EBM0 449 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 PRR5LQ6MZQ0 368 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 OR52J3Q8NH60 311 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 ATP6V0A1Q93050 837 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 DEFB118Q96PH6 123 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 APOOQ9BUR5 198 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 ACAT2Q9BWD1 397 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 ALG9Q9H6U8 611 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 BLOC1S6Q9UL45 172 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 CCPG1Q9ULG6 757 aa4.25□□□□□ -1.73
PTCD3-205ENST00000464541 FAM220BPB1ANY3 271 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 VEGFDO43915 354 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 STK17BO94768 372 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 P0C879 139 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 SLC35E2P0CK97 266 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 MAPK3P27361 379 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-205ENST00000464541 PTPN4P29074 926 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 SLC6A8P48029 635 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 ALDH3B2P48448 385 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 HSD17B7P56937 341 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 OVGP1Q12889 678 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 ASAH1Q13510 395 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 EIF2B1Q14232 305 aaKnown RBP4.24□□□□□ -1.73
PTCD3-205ENST00000464541 SLC22A10Q63ZE4 541 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 RAB12Q6IQ22 244 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 OLFM4Q6UX06 510 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 CCDC73Q6ZRK6 1079 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 APOBEC3FQ8IUX4 373 aaKnown RBP4.24□□□□□ -1.73
PTCD3-205ENST00000464541 UBQLNLQ8IYU4 475 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 ZNF619Q8N2I2 560 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 Q8N7P7 452 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 TMEM185AQ8NFB2 350 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 RFESDQ8TAC1 157 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 EXOC6Q8TAG9 804 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 CCDC51Q96ER9 411 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 CASD1Q96PB1 797 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 ATP6V0BQ99437 205 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 NDUFAF3Q9BU61 184 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 HCAR1Q9BXC0 346 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 ELOVL4Q9GZR5 314 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 NACA2Q9H009 215 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 IKZF5Q9H5V7 419 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 EXOSC3Q9NQT5 275 aaKnown RBP4.24□□□□□ -1.73
PTCD3-205ENST00000464541 DCAF16Q9NXF7 216 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 MBD2Q9UBB5 411 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 TBK1Q9UHD2 729 aa4.24□□□□□ -1.73
PTCD3-205ENST00000464541 HOOK1Q9UJC3 728 aaKnown RBP4.24□□□□□ -1.73
PTCD3-205ENST00000464541 RRP15Q9Y3B9 282 aaKnown RBP4.24□□□□□ -1.73
PTCD3-205ENST00000464541 ZMYM6O95789 1325 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 ZNF646O15015 1829 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-205ENST00000464541 SYNJ2BP-COX16A0A087WUM0 186 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-205ENST00000464541 NUDT21O43809 227 aaKnown RBP4.23□□□□□ -1.73
PTCD3-205ENST00000464541 KERAO60938 352 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 TOXO94900 526 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 SLC2A10O95528 541 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 GUCA1CO95843 209 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 IGSF6O95976 241 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 KRTAP12-2P59991 146 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 SRP54P61011 504 aaKnown RBP4.23□□□□□ -1.73
PTCD3-205ENST00000464541 LGSNQ5TDP6 509 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 UNC5DQ6UXZ4 953 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 GOLGA7Q7Z5G4 137 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 GPBP1Q86WP2 473 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 UNC5CLQ8IV45 518 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 BATF2Q8N1L9 274 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 LRRC17Q8N6Y2 441 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 OR13F1Q8NGS4 319 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 NAP1L2Q9ULW6 460 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-205ENST00000464541 MOKQ9UQ07 419 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 ATP6V0A2Q9Y487 856 aa4.23□□□□□ -1.73
PTCD3-205ENST00000464541 ABCC9O60706 1549 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 SLC9B1P1A6NJY1 282 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 SLC4A1P02730 911 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 CXCL10P02778 98 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 GNSP15586 552 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 TDO2P48775 406 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 NOP14P78316 857 aaKnown RBP4.22□□□□□ -1.73
PTCD3-205ENST00000464541 ZNF79Q15937 498 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 CARTPTQ16568 116 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 ZSWIM7Q19AV6 140 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 ISXQ2M1V0 245 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms