RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ZNF195O14628 629 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 TM9SF1O15321 606 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 SLC16A5O15375 505 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CCNT2O60583 730 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 WDR47O94967 919 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 OR4F21O95013 312 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ZWINTO95229 277 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ETHE1O95571 254 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 C8GP07360 202 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 RBP1P09455 135 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 MYL2P10916 166 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 GFAPP14136 432 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 VCLP18206 1134 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 XRCC1P18887 633 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 POLR2CP19387 275 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 MDH1P40925 334 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 MAPK9P45984 424 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CCT5P48643 541 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 KPNA2P52292 529 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 SLC18A1P54219 525 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 PNLIPRP1P54315 467 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 TSTA3Q13630 321 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 PDK4Q16654 411 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF630Q2M218 657 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF750Q32MQ0 723 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 MINDY4Q4G0A6 757 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ARL13AQ5H913 290 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 VWA5B1Q5TIE3 1220 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 HHATQ5VTY9 493 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 LIPMQ5VYY2 423 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CLEC6AQ6EIG7 209 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 SCIMPQ6UWF3 145 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 UNC5DQ6UXZ4 953 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 DCDC5Q6ZRR9 648 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 Q6ZS92 163 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 TMEM26Q6ZUK4 368 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 FRA10AC1Q70Z53 315 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 PRSS42Q7Z5A4 293 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CROCCP2Q86T23 111 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ADAMTSL2Q86TH1 951 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 THOC6Q86W42 341 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 KLHDC8AQ8IYD2 350 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 TEX9Q8N6V9 391 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CCNYL1Q8N7R7 359 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 OR2A1Q8NGT9 310 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 OR2T11Q8NH01 316 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 RFWD2Q8NHY2 731 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 GABPB2Q8TAK5 448 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 FAM76AQ8TAV0 307 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 STAG3L4Q8TBR4 150 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 AGAP11Q8TF27 550 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF75CPQ92670 426 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 NEIL2Q969S2 332 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 NMD3Q96D46 503 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 L3HYPDHQ96EM0 354 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CABS1Q96KC9 395 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF317Q96PQ6 595 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 OR6C1Q96RD1 312 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 EGFL8Q99944 293 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 TSSK1BQ9BXA7 367 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CHST8Q9H2A9 424 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 TUBB1Q9H4B7 451 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 NOL11Q9H8H0 719 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 FAM60AQ9NP50 221 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 FARSBQ9NSD9 589 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 WWOXQ9NZC7 414 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 EPHA6Q9UF33 1036 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 TAC3Q9UHF0 121 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ZDHHC2Q9UIJ5 367 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ACSL5Q9ULC5 683 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 RNF11Q9Y3C5 154 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 FIS1Q9Y3D6 152 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 TIMM22Q9Y584 194 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 SVILO95425 2214 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 A0A1B0GUH1 482 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 FEZF1A0PJY2 475 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 MBD3L4A6NDZ8 208 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 MBD3L3A6NE82 208 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 LILRA5A6NI73 299 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 OR5K4A6NMS3 321 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 STX16-NPEPL1H3BU86 382 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CLIC1O00299 241 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 IFRD1O00458 451 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 STX16O14662 325 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 KPNA5O15131 536 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 LCMT2O60294 686 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CTSVO60911 334 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 SH3BGRLO75368 114 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 SUPT7LO94864 414 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 VIPP01282 170 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CATP04040 527 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 SERPINE1P05121 402 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 RAB40ALP0C0E4 278 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CDH1P12830 882 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ST6GAL1P15907 406 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 UGT2B7P16662 529 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 NPPBP16860 134 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 NELFEP18615 380 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 IMPDH1P20839 514 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms