RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 PGM2Q96G03 612 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 RMND5BQ96G75 393 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 PELOQ9BRX2 385 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 WDR41Q9HAD4 459 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 NMRK1Q9NWW6 199 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 MAT2BQ9NZL9 334 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 B4GALT7Q9UBV7 327 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 ZNF639Q9UID6 485 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 CBLCQ9ULV8 474 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 DLGAP4Q9Y2H0 992 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 POLR3HQ9Y535 204 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 DNAJC15Q9Y5T4 150 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 ACTL7BQ9Y614 415 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 DSCAMO60469 2012 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 PRR14LQ5THK1 2151 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 LSM1O15116 133 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 TM9SF1O15321 606 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 CTIFO43310 598 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ITM2AO43736 263 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 OR10H2O60403 315 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 CRCPO75575 148 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 LYPLA1O75608 230 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ERAL1O75616 437 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 LRATO95237 230 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 CBX7O95931 251 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 P04436 131 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ATP1B1P05026 303 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 FGF4P08620 206 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 GABRA1P14867 456 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 PORP16435 677 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 TNNI3P19429 210 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 TACR1P25103 407 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 CEACAM8P31997 349 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 SERPINB5P36952 375 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 FEN1P39748 380 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 KIR2DL3P43628 341 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ASCL1P50553 236 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 XKP51811 444 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 PPP2R2AP63151 447 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ADAM8P78325 824 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 CRYZQ08257 329 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ZNF763Q0D2J5 394 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 FUT7Q11130 342 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ZNF267Q14586 743 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 IMPG1Q17R60 797 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 PRICKLE4Q2TBC4 344 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 FBXL19-AS1Q494R0 122 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ACSF3Q4G176 576 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 XKR7Q5GH72 579 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 WLSQ5T9L3 541 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 FAM111BQ6SJ93 734 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 RNF111Q6ZNA4 994 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 C7orf57Q8NEG2 295 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 TNIP2Q8NFZ5 429 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 OR10G3Q8NGC4 313 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 NEIL3Q8TAT5 605 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 FAM76AQ8TAV0 307 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 TWIST2Q8WVJ9 160 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 RIT1Q92963 219 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ADIPOR1Q96A54 375 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 CTHRC1Q96CG8 243 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 TLCD1Q96CP7 247 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 KLHL29Q96CT2 875 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 SPACA9Q96E40 222 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ART5Q96L15 291 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 C20orf27Q9GZN8 174 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 WWTR1Q9GZV5 400 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 LDAHQ9H6V9 325 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ZNF395Q9H8N7 513 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ZFP64Q9NPA5 681 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 MYNNQ9NPC7 610 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 COPS7AQ9UBW8 275 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 GIMAP2Q9UG22 337 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ZDHHC2Q9UIJ5 367 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 ACAD8Q9UKU7 415 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 CNOT11Q9UKZ1 510 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 DTX4Q9Y2E6 619 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 FIS1Q9Y3D6 152 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 PCDHGB3Q9Y5G1 929 aa7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 CHCHD2Q9Y6H1 151 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-210ENST00000462553 GNG14A0A1W2PPG7 69 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 OR6C76A6NM76 312 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 FAM47E-STBD1D6RA91 191 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 SLC28A1O00337 649 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 SYT5O00445 386 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 PIP5K1BO14986 540 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 GUCY1B2O75343 617 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 ATE1O95260 518 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 SERPINE1P05121 402 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 JUNP05412 331 aaKnown RBP7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 ANXA4P09525 319 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 FBXO45P0C2W1 286 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 LINC00032P0C843 101 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 NEFHP12036 1026 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 DRD2P14416 443 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 PCSK2P16519 638 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 SDC1P18827 310 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 DDCP20711 480 aa7.24□□□□□ -1.25
CDC42BPA-210ENST00000462553 NT5EP21589 574 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms