RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 Q6ZS92 163 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 SHISA6Q6ZSJ9 500 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 KBTBD2Q8IY47 623 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 SAMD14Q8IZD0 417 aaPredicted RBP5.32□□□□□ -1.56
VPS36-202ENST00000462289 MMP21Q8N119 569 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 AMER2Q8N7J2 671 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 RBMXL3Q8N7X1 1067 aaKnown RBP5.32□□□□□ -1.56
VPS36-202ENST00000462289 ZNF615Q8N8J6 731 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 DTX3Q8N9I9 347 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 FAM47BQ8NA70 645 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 SLC16A11Q8NCK7 471 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 MORN4Q8NDC4 146 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 OR1N1Q8NGS0 311 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 OR14A16Q8NHC5 309 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 NUBPLQ8TB37 319 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 ACTRT2Q8TDY3 377 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 SREK1Q8WXA9 508 aaKnown RBP5.32□□□□□ -1.56
VPS36-202ENST00000462289 CCT6BQ92526 530 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 HAS2Q92819 552 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 TESCQ96BS2 214 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 COQ8BQ96D53 544 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 MTFMTQ96DP5 389 aaKnown RBP5.32□□□□□ -1.56
VPS36-202ENST00000462289 EGLN2Q96KS0 407 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 PPP3R2Q96LZ3 170 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 MAGEB18Q96M61 343 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 LPAR4Q99677 370 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 ALOXE3Q9BYJ1 711 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 BRINP2Q9C0B6 783 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 LHPPQ9H008 270 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 SLC25A18Q9H1K4 315 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 MANSC1Q9H8J5 431 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 COPS7BQ9H9Q2 264 aaPredicted RBP5.32□□□□□ -1.56
VPS36-202ENST00000462289 LRTM1Q9HBL6 345 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 SH2D2AQ9NP31 389 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 SLAMF7Q9NQ25 335 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 NKIRAS1Q9NYS0 192 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 MAT2BQ9NZL9 334 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 ATP6V1HQ9UI12 483 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 ERVK-11Q9UQG0 969 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 PTPN13Q12923 2485 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 SPTAN1Q13813 2472 aaKnown RBP5.32□□□□□ -1.56
VPS36-202ENST00000462289 ESPL1Q14674 2120 aa5.32□□□□□ -1.56
VPS36-202ENST00000462289 PCNX1Q96RV3 2341 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 A0A087WV62 115 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 IGHV3-20A0A0C4DH32 117 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 ARGFXA6NJG6 315 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 MKRN2OSH3BPM6 223 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 MASP2O00187 686 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 PSMD12O00232 456 aaPredicted RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 PEX12O00623 359 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 PRKNO60260 465 aaPredicted RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 B4GALT2O60909 372 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 LDB3O75112 727 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 VPS4BO75351 444 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 SH3BGRLO75368 114 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 PRKRAO75569 313 aaKnown RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 CDC123O75794 336 aaPredicted RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 SEC24DO94855 1032 aaPredicted RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 NADKO95544 446 aaPredicted RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 CHEK2O96017 543 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 GBAP04062 536 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 CELA2AP08217 269 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 IL3P08700 152 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 ANXA4P09525 319 aaPredicted RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 ALDOCP09972 364 aaKnown RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 CT62P0C5K7 136 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 LINC00032P0C843 101 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 ITGAMP11215 1152 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 PRPS2P11908 318 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 PORP16435 677 aaPredicted RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 CPN2P22792 545 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 TLX1P31314 330 aaPredicted RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 ASMTP46597 345 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 WNT3P56703 355 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 CLDN8P56748 225 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 OR4D2P58180 307 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 MLF1P58340 268 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 TAS2R50P59544 299 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 ERVK-8P63133 956 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 IRX1P78414 480 aaPredicted RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 PLIN5Q00G26 463 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 MFAP5Q13361 173 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 HEPACAMQ14CZ8 416 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 MINDY4Q4G0A6 757 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 ZNF628Q5EBL2 1059 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 SGO1Q5FBB7 561 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 HHATQ5VTY9 493 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 ATG16L1Q676U5 607 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 RPUSD3Q6P087 351 aaKnown RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 TMEM81Q6P7N7 255 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 CRIP3Q6Q6R5 217 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 CYP20A1Q6UW02 462 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 EPGNQ6UW88 154 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 SCIMPQ6UWF3 145 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 WDR75Q8IWA0 830 aaKnown RBP5.31□□□□□ -1.56
VPS36-202ENST00000462289 PRSS58Q8IYP2 241 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 OR2L13Q8N349 312 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 TMEM132CQ8N3T6 1108 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 Q8NA96 180 aa5.31□□□□□ -1.56
VPS36-202ENST00000462289 CLEC1AQ8NC01 280 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms