RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SLC35A4Q96G79 324 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 ZC3HAV1LQ96H79 300 aaKnown RBP9.79□□□□□ -0.84
CBX3-205ENST00000462165 ZNF845Q96IR2 970 aaPredicted RBP9.79□□□□□ -0.84
CBX3-205ENST00000462165 COL21A1Q96P44 957 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 LRRC1Q9BTT6 524 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 PRODH2Q9UF12 536 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 DKKL1Q9UK85 242 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 ADAM29Q9UKF5 820 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 PLLPQ9Y342 182 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 RNF11Q9Y3C5 154 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 ANK2Q01484 3957 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.78□□□□□ -0.84
CBX3-205ENST00000462165 TCRBV9S1A1TA0A576 114 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 C1orf226A1L170 272 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 GOLGA6L10A6NI86 522 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 EFCAB8A8MWE9 144 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 B4DXG7 233 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 NID1P14543 1247 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 DPP4P27487 766 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 EMDP50402 254 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 DSCR4P56555 118 aaPredicted RBP9.78□□□□□ -0.84
CBX3-205ENST00000462165 B3GALT5-AS1P59052 145 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 SIRPAP78324 504 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 DMTNQ08495 405 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 GTF2H2Q13888 395 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 FGFBP1Q14512 234 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 GUSBP1Q15486 140 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 BEX5Q5H9J7 111 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 HMBOX1Q6NT76 420 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 GTF2H2CQ6P1K8 395 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 PODNL1Q6PEZ8 512 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 SH2D5Q6ZV89 423 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 PAGE2Q7Z2X7 111 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 GOLGA7Q7Z5G4 137 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 MILR1Q7Z6M3 343 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 PHC2Q8IXK0 858 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 KLHL7Q8IXQ5 586 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 ZNF610Q8N9Z0 462 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 OR52R1Q8NGF1 315 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 RNF138Q8WVD3 245 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 FIG4Q92562 907 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 TMBIM1Q969X1 311 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 NXNL1Q96CM4 212 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 TRIM31Q9BZY9 425 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 IPPKQ9H8X2 491 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 RNF122Q9H9V4 155 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 GPR55Q9Y2T6 319 aaPredicted RBP9.78□□□□□ -0.84
CBX3-205ENST00000462165 ACOT9Q9Y305 439 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 PCDHA9Q9Y5H5 950 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 ABCA1O95477 2261 aa9.78□□□□□ -0.84
CBX3-205ENST00000462165 CCDC189A1A4V9 331 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 KLF4O43474 513 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 TSPAN2O60636 221 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 TNFRSF21O75509 655 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 ERAL1O75616 437 aaKnown RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 REM1O75628 298 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 CLDN9O95484 217 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 KLK1P06870 262 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 THBDP07204 575 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 GFAPP14136 432 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 TCP1P17987 556 aaKnown RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 CSNK2A2P19784 350 aaPredicted RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 TBXA2RP21731 343 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 TCEA1P23193 301 aaKnown RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 GRK2P25098 689 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 CRABP2P29373 138 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 DEKP35659 375 aaKnown RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 FEN1P39748 380 aaKnown RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 PIK3CGP48736 1102 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 GAS1P54826 345 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 ALDH18A1P54886 795 aaKnown RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 ATP5J2P56134 94 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 CLDN15P56746 228 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 EEFSECP57772 596 aaKnown RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 DUSP2Q05923 314 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 EFR3AQ14156 821 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 PFKFB4Q16877 469 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 TRMT12Q53H54 448 aaKnown RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 CCNYL2Q5T2Q4 361 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 ANKRD34AQ69YU3 496 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 OR5M10Q6IEU7 315 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 METTL2BQ6P1Q9 378 aaKnown RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 ZNF704Q6ZNC4 412 aaPredicted RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 UBQLNLQ8IYU4 475 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 CENPLQ8N0S6 344 aaPredicted RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 ZNF611Q8N823 705 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 TRPC4APQ8TEL6 797 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 BTBD9Q96Q07 612 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 AHSPQ9NZD4 102 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 PROCRQ9UNN8 238 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 ZNF175Q9Y473 711 aa9.77□□□□□ -0.85
CBX3-205ENST00000462165 TNPO3Q9Y5L0 923 aaKnown RBP9.77□□□□□ -0.85
CBX3-205ENST00000462165 PRR14LQ5THK1 2151 aa9.76□□□□□ -0.85
CBX3-205ENST00000462165 RNF223E7ERA6 249 aa9.76□□□□□ -0.85
CBX3-205ENST00000462165 HS3ST1O14792 307 aa9.76□□□□□ -0.85
CBX3-205ENST00000462165 EIF3HO15372 352 aaKnown RBP eCLIP9.76□□□□□ -0.85
CBX3-205ENST00000462165 GUCY1B2O75343 617 aa9.76□□□□□ -0.85
CBX3-205ENST00000462165 PLAUP00749 431 aa9.76□□□□□ -0.85
CBX3-205ENST00000462165 IFNA2P01563 188 aa9.76□□□□□ -0.85
CBX3-205ENST00000462165 CT45A8P0DMV1 189 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms