RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 SF3A2Q15428 464 aaKnown RBP11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 DEFB115Q30KQ5 88 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 ENTPD8Q5MY95 495 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 TMEM91Q6ZNR0 172 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 C9orf62Q8N4C0 152 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 OR4Q3Q8NH05 313 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 ZNF649Q9BS31 505 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 GTPBP2Q9BX10 602 aaKnown RBP11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 MS4A8Q9BY19 250 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 GLIPR2Q9H4G4 154 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 ISG20L2Q9H9L3 353 aaKnown RBP11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 ZCCHC3Q9NUD5 404 aaKnown RBP11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 MRPS18AQ9NVS2 196 aaKnown RBP11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 EXTL2Q9UBQ6 330 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 IL36AQ9UHA7 158 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 GSAPA4D1B5 854 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 FAM170BA6NMN3 283 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 LEUTXA8MZ59 168 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 FABP7O15540 132 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 SPINT1O43278 529 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 SLC43A1O75387 559 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 ACP5P13686 325 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 TRIM23P36406 574 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 MAB21L1Q13394 359 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 FZD5Q13467 585 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 GPR176Q14439 515 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 FCN2Q15485 313 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 KLBQ86Z14 1044 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 AKAP1Q92667 903 aaKnown RBP eCLIP11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 ZG16BQ96DA0 208 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 TCEAL4Q96EI5 215 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 PRRC1Q96M27 445 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 MACROD1Q9BQ69 325 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 HDHD2Q9H0R4 259 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 C11orf49Q9H6J7 331 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 SLC28A3Q9HAS3 691 aa11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 EXOSC1Q9Y3B2 195 aaKnown RBP11.03□□□□□ -0.64
PDZRN3-203ENST00000462146 A0A0A6YYJ9 748 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 LOC105371267A0A1B0GV96 52 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 ZC3H12DA2A288 527 aaKnown RBP11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 KDM4EB2RXH2 506 aaPredicted RBP11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 H7BY64 318 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 TGM5O43548 720 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 ORC5O43913 435 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 PQBP1O60828 265 aaKnown RBP11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 POP7O75817 140 aaKnown RBP11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 SERPIND1P05546 499 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 SYPP08247 313 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 ACADLP28330 430 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 IFNA8P32881 189 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 FRKP42685 505 aaPredicted RBP11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 DUSP6Q16828 381 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 EOGTQ5NDL2 527 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 IDNKQ5T6J7 187 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 PIP5KL1Q5T9C9 394 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 BCL2L15Q5TBC7 163 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 RAET1GQ6H3X3 334 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 SLC39A11Q8N1S5 342 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 ANGPTL6Q8NI99 470 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 PRAP1Q96NZ9 151 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 SEMA4GQ9NTN9 838 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 CSNK1G3Q9Y6M4 447 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 SCN2AQ99250 2005 aa11.02□□□□□ -0.64
PDZRN3-203ENST00000462146 TRAV6A0A075B6T7 132 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 FAM183AA6NL82 134 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 KPNA3O00505 521 aaPredicted RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 SOCS6O14544 535 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 NOS1APO75052 506 aaPredicted RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 TRIM3O75382 744 aaPredicted RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 SCO1O75880 301 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 SYN1P17600 705 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 GPR4P46093 362 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 SRP9P49458 86 aaKnown RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 DUSP2Q05923 314 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 LASP1Q14847 261 aaKnown RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 ZNF805Q5CZA5 627 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 LY6G5CQ5SRR4 150 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 FAM27D1Q5T7N8 215 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 KIAA1211LQ6NV74 962 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 UBE3DQ7Z6J8 389 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 CCDC28AQ8IWP9 274 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 KRT78Q8N1N4 520 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 PLA2G15Q8NCC3 412 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 OR8H1Q8NGG4 311 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 PCNPQ8WW12 178 aaKnown RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 PHF21AQ96BD5 680 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 OTULINQ96BN8 352 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 C16orf58Q96GQ5 468 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 CAPNS2Q96L46 248 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 PPIL3Q9H2H8 161 aaKnown RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 STMN3Q9NZ72 180 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 NFKBIL1Q9UBC1 381 aaPredicted RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 SLC9A8Q9Y2E8 581 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 SIRT4Q9Y6E7 314 aaPredicted RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 XIRP2A4UGR9 3374 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 SCN3AQ9NY46 2000 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 SGK494L7N484 410 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 KIAA0355O15063 1070 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 PI15O43692 258 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 PIP5K1CO60331 668 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms