RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 C14orf105Q9NVL8 296 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 GPATCH2Q9NW75 528 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 GIN1Q9NXP7 522 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 TMEM9Q9P0T7 183 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 ATXN7L1Q9ULK2 861 aaPredicted RBP8.36□□□□□ -1.07
VPS50-207ENST00000458530 C19orf53Q9UNZ5 99 aaPredicted RBP8.36□□□□□ -1.07
VPS50-207ENST00000458530 LRCH1Q9Y2L9 728 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 LRRC42Q9Y546 428 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 TLN1Q9Y490 2541 aaKnown RBP8.36□□□□□ -1.07
VPS50-207ENST00000458530 FER1L5A0AVI2 2057 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 A0A0G2JPF8 293 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 A0A1W2PQM1 296 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 HNRNPCL2B2RXH8 293 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 HNRNPCL3B7ZW38 293 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 B8ZZF3 427 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 H3BMH7 237 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 UPK1AO00322 258 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 NTN3O00634 580 aaPredicted RBP8.35□□□□□ -1.07
VPS50-207ENST00000458530 ADAMDEC1O15204 470 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 RRP8O43159 456 aaKnown RBP8.35□□□□□ -1.07
VPS50-207ENST00000458530 DPM1O60762 260 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 PRAMEF2O60811 474 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 B4GALT2O60909 372 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 E2F6O75461 281 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 CYC1P08574 325 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 ALOX5P09917 674 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 TFPTP0C1Z6 253 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 HNRNPCL4P0DMR1 293 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 OR12D1P0DN82 309 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 ETS2P15036 469 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 FOLR1P15328 257 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 ZNF23P17027 643 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 ALAS2P22557 587 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 AQP1P29972 269 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 MAGEA2P43356 314 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 STT3AP46977 705 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 RPS26P62854 115 aaKnown RBP8.35□□□□□ -1.07
VPS50-207ENST00000458530 MAP4K2Q12851 820 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 EPS8Q12929 822 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 ILKQ13418 452 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 IL11RAQ14626 422 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 LTB4RQ15722 352 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 LRRC36Q1X8D7 754 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 GPAT3Q53EU6 434 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 WLSQ5T9L3 541 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 RHBDD2Q6NTF9 364 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 MFSD12Q6NUT3 480 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 RNF111Q6ZNA4 994 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 QSOX2Q6ZRP7 698 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 PIWIL3Q7Z3Z3 882 aaKnown RBP8.35□□□□□ -1.07
VPS50-207ENST00000458530 AMIGO2Q86SJ2 522 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 CYP4Z1Q86W10 505 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 PPP1R3BQ86XI6 285 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 HIPK1Q86Z02 1210 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 ZDHHC13Q8IUH4 622 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 SLC44A2Q8IWA5 706 aaPredicted RBP8.35□□□□□ -1.07
VPS50-207ENST00000458530 SPACA3Q8IXA5 215 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 OR4N5Q8IXE1 308 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 AGBL5Q8NDL9 886 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 SLC38A5Q8WUX1 472 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 XAGE5Q8WWM1 108 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 TTC9Q92623 222 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 PROX1Q92786 737 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 KAT2AQ92830 837 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 PMM1Q92871 262 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 FGF11Q92914 225 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 UCN3Q969E3 161 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 ANKRD9Q96BM1 317 aaPredicted RBP8.35□□□□□ -1.07
VPS50-207ENST00000458530 ITPKCQ96DU7 683 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 TRNT1Q96Q11 434 aaKnown RBP8.35□□□□□ -1.07
VPS50-207ENST00000458530 OR7D2Q96RA2 312 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 ZNF347Q96SE7 839 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 STACQ99469 402 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 YIPF2Q9BWQ6 316 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 SEMA4CQ9C0C4 833 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 SEMA6AQ9H2E6 1030 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 RUBCNLQ9H714 662 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 BCL2L10Q9HD36 194 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 IL1RAPQ9NPH3 570 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 EQTNQ9NQ60 294 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 POLE3Q9NRF9 147 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 DUSP22Q9NRW4 184 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 MAT2BQ9NZL9 334 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 IFT80Q9P2H3 777 aaPredicted RBP8.35□□□□□ -1.07
VPS50-207ENST00000458530 SEC14L3Q9UDX4 400 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 SLC13A4Q9UKG4 626 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 RAB26Q9ULW5 256 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 SATB2Q9UPW6 733 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 CFL2Q9Y281 166 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 PADI2Q9Y2J8 665 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 FAM32AQ9Y421 112 aaKnown RBP8.35□□□□□ -1.07
VPS50-207ENST00000458530 ORC6Q9Y5N6 252 aa8.35□□□□□ -1.07
VPS50-207ENST00000458530 SAC3D1A6NKF1 404 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 FAM227AF5H4B4 570 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 CASC3O15234 703 aaKnown RBP8.34□□□□□ -1.07
VPS50-207ENST00000458530 SCRG1O75711 98 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 PRSS23O95084 383 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 RASAL1O95294 804 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 PGM3O95394 542 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 HPRP00739 348 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms